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Name : serS (midi_00396) Accession : YP_004679392.1 Strain : Candidatus Midichloria mitochondrii IricVA Genome accession: NC_015722 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 367724 - 369004 bp Length : 1281 bp Strand : + Note : - DNA sequence : ATGTGGGACGTAAAATTTATTAGGGAAAATCTAGAAAGCTTTATTGAAGGTATGCAAAAACGTGGAGAGGAAATTGATCT TGCTCAATTACTGGAATTAGACGCCTCTACCAGAAAACAAAAATCTATCCTGCAAGAATTGCAAAATAAAAGAAATCAGA TCGCAAAGCAGATAGGAATATTAAAATCAAAAAACAGCCCTGTACCGGAAAGTTTATTCTCAGAAGCGGAGAGTATTAAT AAAGAATCTCCAATAATTGAACAACAAATCGCAGAACTAGATTCAGCGCTACAACATTTGCTTTGTAGGTTGCCAAATAA CCCAGCAACTGACGTTCCATTTGGCAAGAGTGAAGAAGATAACATAGTCATAAGGAAGGTCGGAGAGGTTAGACAATTTG ATTTTATCCCTAAACAACATTTTGATATCGATAAAGGCCGGATGGATTTTGAAAGAGCGGCTGAAATTTCTGGCTCTCGG TTTGTAATTCTGAAAAATGACTTCGCACTAATGGAGAGAGCGTTAATAAATTTTATGTTAGATCATCATACTGAACAGTT TGGTTATACCGAATTTTCTTTGCCTTATATGGTAAATGCAAAGTCTATGTTTGGTACTGGTCAGCTGCCGAAATTTAGTG AGGACTCTTTTGAAACCAAAGATGGATTTAGATTGATACCAACCGCAGAAGTCCCATTAACTAATCTAGTTTCAGATCAG ATAATTGAAGAAAAGCAGCTTCCTCTCAGGATGACCGCTCATACTCCATGTTTTAGATCAGAAGCTGGTAGTGCTGGTAA AGATACTAGAGGAATGTTAAGACAACATCAATTTCATAAAGTAGAATTAGTAAGCATAGTCAAACCAGAAGACTCAGAGA ATGAATTGGAACGTATGACTTCAGTTGCTGAGAGTGTGTTACAAAAGTTAGAATTACCATATAGAGTTATGCTTCTATGC TCTCAGGATATGGGGTTTTCTGCAAAGAAGACTTATGACATAGAGGTCTGGTTACCAGGACAAAATTGTTATCGAGAGAT TTCTAGCTGCTCTAATTGTGGCGATTTTCAAGCACGCAGAATGAAAGCACGCTACCGGGATGAAAGAAATAAACAAATCG TTACTTTACATACGCTTAATGGTTCTGCTTTGGCTGTAGGGAGAGCTATGGTGGCAATTATAGAAAATTATCAAAACGAA AATGGTGACATTATTATCCCAAAAGTGTTACAAAGTTATATGAATAATAAAACGGTAATCAAGGCTAGTAAAAATGGATG A Protein sequence : MWDVKFIRENLESFIEGMQKRGEEIDLAQLLELDASTRKQKSILQELQNKRNQIAKQIGILKSKNSPVPESLFSEAESIN KESPIIEQQIAELDSALQHLLCRLPNNPATDVPFGKSEEDNIVIRKVGEVRQFDFIPKQHFDIDKGRMDFERAAEISGSR FVILKNDFALMERALINFMLDHHTEQFGYTEFSLPYMVNAKSMFGTGQLPKFSEDSFETKDGFRLIPTAEVPLTNLVSDQ IIEEKQLPLRMTAHTPCFRSEAGSAGKDTRGMLRQHQFHKVELVSIVKPEDSENELERMTSVAESVLQKLELPYRVMLLC SQDMGFSAKKTYDIEVWLPGQNCYREISSCSNCGDFQARRMKARYRDERNKQIVTLHTLNGSALAVGRAMVAIIENYQNE NGDIIIPKVLQSYMNNKTVIKASKNG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-98 | 50 |
