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Name : kdsD (HYPMC_0739) Accession : YP_004674548.1 Strain : Hyphomicrobium sp. MC1 Genome accession: NC_015717 Putative virulence/resistance : Virulence Product : arabinose-5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 724678 - 725709 bp Length : 1032 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12805358; Product type e : enzyme DNA sequence : ATGCAACGGGTCATTCCATTCCAGCTACCTGAAATTGAGCGACAGGAAGCAGACGTTGTCTCCGGCGAGACGACACCGAT TTCGTCCGCCCTTCGTACACTCAATCTCGCGGCCGAAGGGCTCGCCCAGGTCGCGCACGATATCGCTGGCCCCCTCTCCG CCGCTTTCGATGAAGCCGTCAGCCGGCTGAAGGCCGTCGACGGCCGCGTCATCGTAACGGGTATCGGCAAGAGCGGCCAC GTCGCCCAGAAGATTGCCGCGACGTTCGCATCGACCGGTACGCCCGCGTTCTTCGTCCATCCGAGCGAAGCCTCCCACGG CGATCTCGGCATGATCACGAAGTCCGACATCATCGTCGCGTTTTCCTGGTCGGGCGAAACGGTCGAACTGAAACCGATCA TCACGTATTCGCGGCGCTTCGCGGTACCGCTCATCGCCATCACATCGCAGGCAAACTCTGCTCTTGGCAAACAGGCGGAC GTCGTTCTGCAGCTGCCGCGTGTGAAGGAAGCCTGCCCCCACGGCCTTGCGCCGACGACATCGACGACCATTCAGCTCGC CCTCGGCGACAGCCTTGCCATCGCGCTTCTCGACGCGCGCGGCTTCACCGCCCACGATTTCAAGATTTTCCATCCCGGTG GCTCTCTCGGCGCTAACCTCAAATACGTTTCCGACGTCATGCACCAGAATGAGCGGATGCCGCTGATCGAGAGTGGCGCT TCGATGTCGGAGGCGCTTGTTGCGATAACGGCGAAAAGCTTCGGCTGCGTCGGTGTCACCGATGCCGACGGCAAGCTCAT CGGCGTCATCACCGATGGCGATTTGCGTCGCCATATGGGGCCGGACTTGCTTCTGGCCAGCGTCAATGACGTCATGACCG CCAAGCCCAAAACCATTGCACCGACGTTGCTGGCATCGGCCGCTCTGGAACTCATCAATTCCTCGCGGATCACGGCGCTC TTCGTCGTCGACAAGCAAAAGCCGGTGGGCATCGTGCATGTCCACGATCTGCTGCGCGTCGGCGTCGCCTAG Protein sequence : MQRVIPFQLPEIERQEADVVSGETTPISSALRTLNLAAEGLAQVAHDIAGPLSAAFDEAVSRLKAVDGRVIVTGIGKSGH VAQKIAATFASTGTPAFFVHPSEASHGDLGMITKSDIIVAFSWSGETVELKPIITYSRRFAVPLIAITSQANSALGKQAD VVLQLPRVKEACPHGLAPTTSTTIQLALGDSLAIALLDARGFTAHDFKIFHPGGSLGANLKYVSDVMHQNERMPLIESGA SMSEALVAITAKSFGCVGVTDADGKLIGVITDGDLRRHMGPDLLLASVNDVMTAKPKTIAPTLLASAALELINSSRITAL FVVDKQKPVGIVHVHDLLRVGVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-50 | 42 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-50 | 42 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 5e-50 | 42 |
