|
Name : yejF (HYPMC_0625) Accession : YP_004674435.1 Strain : Hyphomicrobium sp. MC1 Genome accession: NC_015717 Putative virulence/resistance : Unknown Product : oligopeptide ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 614712 - 616343 bp Length : 1632 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter DNA sequence : ATGGCAAATCCCGTTCCTCTCGTTGACGTGCGCAATCTCTCCGTCGCTTTTGGCGAAGGAAAAGACCTCGTGCAGGTCGT CAACGGCGTCTCGTTCCACATCAACAAGGGCGAAACCGTCGCGCTCGTCGGCGAGTCCGGCTCCGGCAAGACCGTCTCCG CAATGTCGATCTTGCGCCTGTTGCCGAACTCCGCCTCGCATCCGACCGGCGAGATTTTGTTCGGCGGCACCGACATCCTG AAAATGTCTGGCAATGACCTTCGCGAAATCCGCGGCCGCCGCATCTCGATCATTTTCCAAGAGCCGATGACATCGCTCAA CCCGCTTCACACCATCGAGAAGCAGGTCGGCGAAATCATCAAGCTGCACCAAATGCTGCCCGAAGCCAAAACGCGCGAGC GCGTCATCGAGCTTCTGACGAAGGTTGGCATCCGCGATCCGGAGAAGCGCCTCGGCGCCTATCCGCATGAGCTCTCTGGT GGCCAGCGCCAGCGCGTGATGATCGCTATTGCGCTCGCTAACAAACCTGACCTATTGATCGCCGACGAGCCGACTACCGC ACTCGACGTCACCATTCAGGCGCAAATTCTGGAGCTTCTGAAGTCGCTTCAGAAAGAGATGGGCATGGCCATGCTGCTCA TCACCCACGATCTCGGCATCGTGCGCCGCATGGCCGAACGCGTCTACGTCATGCGCAACGGCGACATCGTCGAGACCGGC GACGCCGAACAGATCTTCACCGCACCCAAGCACGCCTACACGCGCCATCTTCTCGATGCCGAGCCGAAAGGCATGCCGCC CGCCGCCGACCCGACGCGTCCCGTCGTCGTCGAGACGGACGATCTGAAAGTCTGGTTCCCGATCAAGAAGGGCCTGTTGC AGCGAACCGTCGATTACGTAAAAGCGGTCGACGGTCTGTCGATGAAACTTCGCGCCGGCGAGACGCTCGGCGTCGTCGGT GAATCCGGCTCCGGCAAAACCACCCTCGGCCTTGCTATCCTGCGGCTCATTTCATCGCAAGGTCCCATCGCCTACGTCGG CAAACGCATCGACGCGCTGACGAACAAGCAGATGCGCCCGCTGCGCAAGGAAATGCAGATCGTCTTCCAGGACCCTTACG GCTCGCTCTCGCCACGGTTGACGGTCGGCCAGATCATCGAGGAAGGGCTTCTGATCCAGAATCCCGAACTCGACGAAGAG CAGCGGCGCGAACGCGTCGGCGCGGAACTGAAGGAAGTCGGACTCGATCCAGCGTCGCAGGATCGCTATCCGCATGAGTT CTCCGGCGGCCAGCGCCAGCGCATCGCGATTGCCCGCGCCATGGTCTTGCAGCCGAAGTTCGTCATGCTCGACGAGCCGA CAAGCGCTCTCGACATGAGCGTTCAGGCCCAGATCGTCGATCTTCTGCGCAAGCTGCAAGCGAACCACGGTCTCGCCTAT CTCTTCATCAGCCACGACCTCAAAGTCGTGCGCGCGCTTTGCAACTACGTCATTGTCATGAAGAACGGCAAAGTCGTCGA AGAAGGCCCCGCGCGCGATATCTTCGAAAAGCCGCAAGACGAATATACCAAGGCGCTGCTCGCGGCAGCCTTCGACATCA AGGTGGCATACAAGGGGGCGCTTGCGAGCTGA Protein sequence : MANPVPLVDVRNLSVAFGEGKDLVQVVNGVSFHINKGETVALVGESGSGKTVSAMSILRLLPNSASHPTGEILFGGTDIL KMSGNDLREIRGRRISIIFQEPMTSLNPLHTIEKQVGEIIKLHQMLPEAKTRERVIELLTKVGIRDPEKRLGAYPHELSG GQRQRVMIAIALANKPDLLIADEPTTALDVTIQAQILELLKSLQKEMGMAMLLITHDLGIVRRMAERVYVMRNGDIVETG DAEQIFTAPKHAYTRHLLDAEPKGMPPAADPTRPVVVETDDLKVWFPIKKGLLQRTVDYVKAVDGLSMKLRAGETLGVVG ESGSGKTTLGLAILRLISSQGPIAYVGKRIDALTNKQMRPLRKEMQIVFQDPYGSLSPRLTVGQIIEEGLLIQNPELDEE QRRERVGAELKEVGLDPASQDRYPHEFSGGQRQRIAIARAMVLQPKFVMLDEPTSALDMSVQAQIVDLLRKLQANHGLAY LFISHDLKVVRALCNYVIVMKNGKVVEEGPARDIFEKPQDEYTKALLAAAFDIKVAYKGALAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-91 | 44 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-91 | 44 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-91 | 44 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-91 | 44 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-105 | 43 |
