Gene Information

Name : yejF (HYPMC_0625)
Accession : YP_004674435.1
Strain : Hyphomicrobium sp. MC1
Genome accession: NC_015717
Putative virulence/resistance : Unknown
Product : oligopeptide ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 614712 - 616343 bp
Length : 1632 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter

DNA sequence :
ATGGCAAATCCCGTTCCTCTCGTTGACGTGCGCAATCTCTCCGTCGCTTTTGGCGAAGGAAAAGACCTCGTGCAGGTCGT
CAACGGCGTCTCGTTCCACATCAACAAGGGCGAAACCGTCGCGCTCGTCGGCGAGTCCGGCTCCGGCAAGACCGTCTCCG
CAATGTCGATCTTGCGCCTGTTGCCGAACTCCGCCTCGCATCCGACCGGCGAGATTTTGTTCGGCGGCACCGACATCCTG
AAAATGTCTGGCAATGACCTTCGCGAAATCCGCGGCCGCCGCATCTCGATCATTTTCCAAGAGCCGATGACATCGCTCAA
CCCGCTTCACACCATCGAGAAGCAGGTCGGCGAAATCATCAAGCTGCACCAAATGCTGCCCGAAGCCAAAACGCGCGAGC
GCGTCATCGAGCTTCTGACGAAGGTTGGCATCCGCGATCCGGAGAAGCGCCTCGGCGCCTATCCGCATGAGCTCTCTGGT
GGCCAGCGCCAGCGCGTGATGATCGCTATTGCGCTCGCTAACAAACCTGACCTATTGATCGCCGACGAGCCGACTACCGC
ACTCGACGTCACCATTCAGGCGCAAATTCTGGAGCTTCTGAAGTCGCTTCAGAAAGAGATGGGCATGGCCATGCTGCTCA
TCACCCACGATCTCGGCATCGTGCGCCGCATGGCCGAACGCGTCTACGTCATGCGCAACGGCGACATCGTCGAGACCGGC
GACGCCGAACAGATCTTCACCGCACCCAAGCACGCCTACACGCGCCATCTTCTCGATGCCGAGCCGAAAGGCATGCCGCC
CGCCGCCGACCCGACGCGTCCCGTCGTCGTCGAGACGGACGATCTGAAAGTCTGGTTCCCGATCAAGAAGGGCCTGTTGC
AGCGAACCGTCGATTACGTAAAAGCGGTCGACGGTCTGTCGATGAAACTTCGCGCCGGCGAGACGCTCGGCGTCGTCGGT
GAATCCGGCTCCGGCAAAACCACCCTCGGCCTTGCTATCCTGCGGCTCATTTCATCGCAAGGTCCCATCGCCTACGTCGG
CAAACGCATCGACGCGCTGACGAACAAGCAGATGCGCCCGCTGCGCAAGGAAATGCAGATCGTCTTCCAGGACCCTTACG
GCTCGCTCTCGCCACGGTTGACGGTCGGCCAGATCATCGAGGAAGGGCTTCTGATCCAGAATCCCGAACTCGACGAAGAG
CAGCGGCGCGAACGCGTCGGCGCGGAACTGAAGGAAGTCGGACTCGATCCAGCGTCGCAGGATCGCTATCCGCATGAGTT
CTCCGGCGGCCAGCGCCAGCGCATCGCGATTGCCCGCGCCATGGTCTTGCAGCCGAAGTTCGTCATGCTCGACGAGCCGA
CAAGCGCTCTCGACATGAGCGTTCAGGCCCAGATCGTCGATCTTCTGCGCAAGCTGCAAGCGAACCACGGTCTCGCCTAT
CTCTTCATCAGCCACGACCTCAAAGTCGTGCGCGCGCTTTGCAACTACGTCATTGTCATGAAGAACGGCAAAGTCGTCGA
AGAAGGCCCCGCGCGCGATATCTTCGAAAAGCCGCAAGACGAATATACCAAGGCGCTGCTCGCGGCAGCCTTCGACATCA
AGGTGGCATACAAGGGGGCGCTTGCGAGCTGA

Protein sequence :
MANPVPLVDVRNLSVAFGEGKDLVQVVNGVSFHINKGETVALVGESGSGKTVSAMSILRLLPNSASHPTGEILFGGTDIL
KMSGNDLREIRGRRISIIFQEPMTSLNPLHTIEKQVGEIIKLHQMLPEAKTRERVIELLTKVGIRDPEKRLGAYPHELSG
GQRQRVMIAIALANKPDLLIADEPTTALDVTIQAQILELLKSLQKEMGMAMLLITHDLGIVRRMAERVYVMRNGDIVETG
DAEQIFTAPKHAYTRHLLDAEPKGMPPAADPTRPVVVETDDLKVWFPIKKGLLQRTVDYVKAVDGLSMKLRAGETLGVVG
ESGSGKTTLGLAILRLISSQGPIAYVGKRIDALTNKQMRPLRKEMQIVFQDPYGSLSPRLTVGQIIEEGLLIQNPELDEE
QRRERVGAELKEVGLDPASQDRYPHEFSGGQRQRIAIARAMVLQPKFVMLDEPTSALDMSVQAQIVDLLRKLQANHGLAY
LFISHDLKVVRALCNYVIVMKNGKVVEEGPARDIFEKPQDEYTKALLAAAFDIKVAYKGALAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-91 44
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-91 44
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-91 44
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-91 44
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-105 43