Gene Information

Name : rph (HYPMC_4703)
Accession : YP_004678475.1
Strain : Hyphomicrobium sp. MC1
Genome accession: NC_015717
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 4515203 - 4515916 bp
Length : 714 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1512252, 1512253, 1885537, 1925027, 6207018, 8501045, 88263018, 93015723; Product type e : enzyme

DNA sequence :
ATGCGACCTTCCAAACGCAAGCCAGACGAGTTGCGCCGTGTTTCAATCGAGCGGGCCGTTTCCAAATATGCCGAAGGCTC
CTGCCTCATCAAATTCGGCGACACCCATGTTCTTTGCACGGCGAGCTTGGAAGAGCGCCTCCCGCAGTGGCTGAAAGGTC
AGGGCCGTGGCTGGGTGACGGCGGAATACTCGATGCTGCCGCGGTCGACGCACGACCGGACGCGGCGCGAGGTGACGAGC
GGCCATCCGTCGGGGCGGACGCAGGAAATTCAGCGTCTCGTCGGCCGGGCGCTTCGCGCGGTCGTCGATCTGACGAAGCT
TGGCGAACGGCAGATCACGGTCGACTGCGACGTCATCCAGGCCGATGGCGGCACGCGCACGGCGTCGATCACGGGCGCGT
GGGTGGCTCTGCACGATTGCATCCAGTGGATGAAAATGCGCGACATGGTGAAGGACACCGTGCTGCGCGATCACGTAGCT
GCCGTGTCGTGCGGTCTCTACAAAGGTGAACCGGTGCTCGATCTCGACTATGCCGAGGACAGCAACGCGGATGCCGATTC
CAATTTCGTGATGACCGGCTCGGGCGGCATCGTCGAAATCCAAGGCACGGCCGAGACGACGCCCTTCACAGAAGATAAGT
TCACCGAGCTGATGGGGCTCGCCAAGAAGGGGATCGGCGAACTCGTTCAGCTGCAGAAGCTGACGGTCGCTTAA

Protein sequence :
MRPSKRKPDELRRVSIERAVSKYAEGSCLIKFGDTHVLCTASLEERLPQWLKGQGRGWVTAEYSMLPRSTHDRTRREVTS
GHPSGRTQEIQRLVGRALRAVVDLTKLGERQITVDCDVIQADGGTRTASITGAWVALHDCIQWMKMRDMVKDTVLRDHVA
AVSCGLYKGEPVLDLDYAEDSNADADSNFVMTGSGGIVEIQGTAETTPFTEDKFTELMGLAKKGIGELVQLQKLTVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-51 52