Gene Information

Name : HYPMC_4574 (HYPMC_4574)
Accession : YP_004678347.1
Strain : Hyphomicrobium sp. MC1
Genome accession: NC_015717
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 4401723 - 4402490 bp
Length : 768 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : transporter

DNA sequence :
GTGCGGCACAAGTCCGATACGACACACATCAGCCACGACAAGGCAGGGCATCTTAGCTTGAGCGATCCGATCATTAAACT
CGACAATGTGCAGTTGACCTTAACGAGCCGCGCCGGGCCAGTACATATCCTGCGTGGCGTGTCGCTTGCGATTCCGCGCG
GGCAATCGGCGGCGATCGTCGGGCCATCAGGATCGGGCAAGACCTCGCTGCTGATGACGATGGCGGGCCTCGAACGGGCG
ACAAGCGGGCGCATTACGGTCGCGGGGCGCGATCTCGGATCGCTGTCGGAAGATAATCTGGCCGTGCTGCGCGGCGCCGA
CATGGGCATCGTGTTCCAGTCGTTTCATCTCGTGCCGACGATGACGGCGCTGGAAAACGTCGCCCTGCCGATGGAGCTTG
CGGGCGAAACGAAGGCCTTCGAGACGGCGCGCGATCTGCTAGCGGAAGTCGGCCTAAGTGCCCGCGTCGATCATTTTCCA
GCGGAGCTTTCGGGCGGTGAGCAGCAGCGCGTTGCGATTGCGCGTGCATTGAGCCGGTCGCCAGACATTTTGTTCGCGGA
CGAACCGACAGGCAATCTCGACGGACGGACGGGCAAGCAGATCATCGAGCTGTTGTTCGGTCTGCGCGAGCGGCGCGGCG
CGACCCTCGTGATCGTCACGCATGACAACAAGCTTGCGGCGATGACCGATCGCGTGATCCGCATGACGGACGGCGCAATC
GTCGCCGACGAGAGGACGGAACCCGCTATGCGCGCGGTTTCGTCGTGA

Protein sequence :
MRHKSDTTHISHDKAGHLSLSDPIIKLDNVQLTLTSRAGPVHILRGVSLAIPRGQSAAIVGPSGSGKTSLLMTMAGLERA
TSGRITVAGRDLGSLSEDNLAVLRGADMGIVFQSFHLVPTMTALENVALPMELAGETKAFETARDLLAEVGLSARVDHFP
AELSGGEQQRVAIARALSRSPDILFADEPTGNLDGRTGKQIIELLFGLRERRGATLVIVTHDNKLAAMTDRVIRMTDGAI
VADERTEPAMRAVSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-35 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HYPMC_4574 YP_004678347.1 ABC transporter ATPase NC_008702.1.4606598. Protein 2e-35 48
HYPMC_4574 YP_004678347.1 ABC transporter ATPase NC_012469.1.7686878. Protein 3e-39 44
HYPMC_4574 YP_004678347.1 ABC transporter ATPase NC_012469.1.7685735. Protein 8e-39 42
HYPMC_4574 YP_004678347.1 ABC transporter ATPase CP001581.1.gene598.p Protein 8e-40 41