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Name : glcA (HYPMC_0466) Accession : YP_004674276.1 Strain : Hyphomicrobium sp. MC1 Genome accession: NC_015717 Putative virulence/resistance : Unknown Product : glycolate permease (LctP family) Function : - COG functional category : C : Energy production and conversion COG ID : COG1620 EC number : - Position : 455938 - 457581 bp Length : 1644 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 11283302, 11785976, 15919996; Product type t : transporter DNA sequence : ATGTGGTCACAAGTTTATGACCCGTTTGGCAGTCTGCTGGTTTCGGCGGCCGTAGCTGTAATCCCGGTGCTTGTGCTCCT TGCCAGCATCGGGATTTTCGAGGTTCGAGCACATATCGCGGCGATCCTCGGCCTGACGGCTGCCCTGCTCGTCGCGATAT TTGCTTACGGCATGCCGACGCAGATGGCCGGAACGGCAGCACTTTATGGCGCTGCGTTCGGTTTTCTGCCGATCGGCTGG ATCATTCTCAATGTAATCTTTCTCTACCGGCTTGCGAGCGAGAAAGGCGAGTTCGATGTCCTGCAGAAATCCATCGGCGC CATCAGCAGCGACAAGCGATTGCAGCTTCTCTTCGTTGCCTTTTCATTCGGCGCCTTTTTTGAAGGCGCGGCGGGCTTCG GAACACCGGTCGCCGTGACGTCTGCGATGCTGATCGGTCTAGGCTTTCCGCCGCTGCCCGCTTCCGGGCTGTCGCTGATC GCCAACACGGCACCGGTTGCATTCGGTGCGCTCGGAACGCCTCTCGTGGCGTTGTCCGCCGTCACCGGCCTCGACCTTTA TAGTTTAAGTGCCACAGTCGGGAGGCTGCTCGCGCCATTCGCGATCATTGTGCCGTTCTGGGTGGTCTGGGCTTTCGTCG GCTTCCGCAAAATGATCGAAGTTTGGCCGCCTATACTAGTGGCGGGTGTTTGCTTCGCAGTTCCGCAGTATCTTGTCTCG AATTTTCACGGACCTTGGCTAGTCAACATTGTTGCCTCGCTCGCATCCATGGCGGGTCTGACCTTGTTTCTGAAAGTTTG GCGCCCCAAGGTGGTCATGACCGAGGTGTCGGACTCTGGCCCTTCGGAACCGTCGCTGGCGGCACACTCGACGCGGCATT CCTCAGACGCATTATGGCGGGCTTGGACGCCTTGGATCATCCTCGCGGTCTTCGTGTTCCTCTGGGGAACGCCGCAGGTC CGGGCCGGTCTTGATGGGATTTGGATCGAGAAAATTCCGGTCGCGGGGCTGCACGATCTCGTGCAGAAGATGCCGCCCGT TGTTCCCGCGCCGAAGGTCGAAGCCGCTGTTTTCAACGTCAATCTTCTGTCGGCGACCGGGACGGGTATCCTGCTGTCCG CAATCGTTTCCGGCCTTTTTTTGGGCTACGGCGTTCTTGATCTCATGCGAATGTACGCGAAGACCATTTACGTGGTTCGC TATTCGCTGATGACGATCTCGTGCATGATGGCCATCGGATTTGTCACGCGGTATTCCGGCAGCGACGCCACTCTCGGTCT GGCACTCGCGCAAACAGGATGGGCGTATCCGTTCTTTGGCACGCTGATCGGTTGGCTTGGCGTCGCGCTCACGGGATCGG ACACGTCATCGAATGTGCTGTTCGGTGGCCTGCAGAAAATTACGGCCCAGCAGCTGGGCATCAATCCAATCCTGATGGCG TCCGCCAATAGCGCTGGCGGCGTCATGGGCAAGATGATCGATGCGCAGTCGATCGTCGTCGCTTCGACCGCAACCAAATG GTACGGCCATGAAGGGTCGATCCTGCGCTTTGTGTTTTTCCATTCGCTTGCGCTGGCGATGCTCGTCGGCCTGCTTGTTA TGGCCGAGACTTATCTTTGGCCTTTCAAGCTTCTTGCGCCGTAG Protein sequence : MWSQVYDPFGSLLVSAAVAVIPVLVLLASIGIFEVRAHIAAILGLTAALLVAIFAYGMPTQMAGTAALYGAAFGFLPIGW IILNVIFLYRLASEKGEFDVLQKSIGAISSDKRLQLLFVAFSFGAFFEGAAGFGTPVAVTSAMLIGLGFPPLPASGLSLI ANTAPVAFGALGTPLVALSAVTGLDLYSLSATVGRLLAPFAIIVPFWVVWAFVGFRKMIEVWPPILVAGVCFAVPQYLVS NFHGPWLVNIVASLASMAGLTLFLKVWRPKVVMTEVSDSGPSEPSLAAHSTRHSSDALWRAWTPWIILAVFVFLWGTPQV RAGLDGIWIEKIPVAGLHDLVQKMPPVVPAPKVEAAVFNVNLLSATGTGILLSAIVSGLFLGYGVLDLMRMYAKTIYVVR YSLMTISCMMAIGFVTRYSGSDATLGLALAQTGWAYPFFGTLIGWLGVALTGSDTSSNVLFGGLQKITAQQLGINPILMA SANSAGGVMGKMIDAQSIVVASTATKWYGHEGSILRFVFFHSLALAMLVGLLVMAETYLWPFKLLAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcA | CAE85240.1 | GlcA protein, putative glycolate permease | Not tested | PAI V 536 | Protein | 2e-74 | 44 |
