Gene Information

Name : ssuB (HYPMC_3964)
Accession : YP_004677739.1
Strain : Hyphomicrobium sp. MC1
Genome accession: NC_015717
Putative virulence/resistance : Unknown
Product : alkanesulfonate ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : 3.6.3.36
Position : 3799692 - 3800582 bp
Length : 891 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter

DNA sequence :
GTGGGCAGTATGACGAGCAACGCGCAGCGAATGGTAATCGATCAACCCGATTTGGACAGGGAAGCCTCCGTCGCGGACAA
GATGATGCAAGCCGTTGACCAGCAGGCCGTGGCGATGTCCACGAGCGATCAAATCGCCGTCGAGAACGTCTCACTGCGCT
ATGGCGGCAGCGCTGGAGTTCTGGCGATCGACAATGTATCCTTCACCGTGCCCGATAACGAATTCTGCGTCATTGTGGGC
CCGTCAGGATGCGGAAAGTCGAGCCTGCTTTATCTGGCGGCCGGCCTTCACGACGCCACGTCTGGACGCATTCTCGTCAA
CGGGCATGAGGTGTTCGAGCCCGGTCGTGAGCGCGGCATGGTCTTTCAGGGATATACACTTTTTCCCTGGCTAACCGTGC
GGGCCAATATCGAGTACGGCCCAAAGCGAAGAGGAATGGCGGCGCCCGAGCGCCGCAAGATCGTCGACCAATACCTTGAA
GAGGTCGGCCTAACGGCGTTTGCGAACCATTACCCGTCGCAGCTGTCCGGAGGCATGAAGCAACGCGTTGCGATTGCGCG
CGCGTTGGCGAACGATCCCGCCGTTCTTTTGATGGACGAACCGTTCGGCGCTCTGGATAGCCAGACGCGAACGACGATGC
AGAAGCTGCTTCTGCGCGTTTGGGAGCGCCATCACAAGACAGTGCTGTTCGTGACGCACGACATCGAAGAAGCGCTTCTT
CTTGGCGACCGCGTGCTGGTGATGACGGCCCGGCCGGGTCGCATCAAGGCTCAGGTGAAGGTAAATATCCCGCGGCCTCG
CACGACCAATCTGATCCTTGAACCGGAATTCATCGCTCTCAAGCGGCAGTTGCTGAGCTTGCTGCACGACGAGATCGACG
AGAACCATTGA

Protein sequence :
MGSMTSNAQRMVIDQPDLDREASVADKMMQAVDQQAVAMSTSDQIAVENVSLRYGGSAGVLAIDNVSFTVPDNEFCVIVG
PSGCGKSSLLYLAAGLHDATSGRILVNGHEVFEPGRERGMVFQGYTLFPWLTVRANIEYGPKRRGMAAPERRKIVDQYLE
EVGLTAFANHYPSQLSGGMKQRVAIARALANDPAVLLMDEPFGALDSQTRTTMQKLLLRVWERHHKTVLFVTHDIEEALL
LGDRVLVMTARPGRIKAQVKVNIPRPRTTNLILEPEFIALKRQLLSLLHDEIDENH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 6e-47 49
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-30 44
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-31 44