Gene Information

Name : yfmT (HYPMC_3540)
Accession : YP_004677316.1
Strain : Hyphomicrobium sp. MC1
Genome accession: NC_015717
Putative virulence/resistance : Unknown
Product : aldehyde dehydrogenase yfmT
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 3392717 - 3394192 bp
Length : 1476 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology

DNA sequence :
ATGAACCCCAACGCTACCGAAACGATCGACGGATTGAAAACCTACAAGCTTTTCATCGACGGCGAGTGGGTAACCTCAAA
GCGCAACGAAATCGCCGACGATCTCAATCCGGCAACCGGAGAAGTTTTCGCACGCACTCAGCAGGCGGGTGGAGAGGAAG
TTGAGAATGCGATTGCAGCCGCTTATCGCGCCAACGCGACGTGGGGTGAAAGCCTTGCGGCCGAGCGCGAGACGCTTCTT
TTGCGCGTTGGAGAGGTCGTGGCGCGGCGCAAGGAAGAGATCCGCGATCTTCTGATCGAGGAATGCGGCTCGGCCTTCAG
CAAGGCGCTCTGGGAAATTGATTACGTTATCGATCTGATGCGCAGCACGGCTGGCGATGTTCGCCATCTCTTCGGTGAGA
CGATGCCGATGACGATGCCGGGTCAGATTTCGATGTCGGTCAGGCGGCCGCTGGGAGTCATCGCCGGTATCGCCCCCTTC
AATTCGCCGTTTCTGCTTTCAATGAAGAAGATCGCTTTCGCGCTTTCGGCCGGAAACACGTTCGTTCTAAAGCCATCCGA
GGAAACGCCGATCTCTGGCGCTATCATCGCCGACGTGTTTCAGGAGGCGGGTTTGCCGAAAGGTGTGCTCAACGTCATTC
CGGGTGCTCCCAAGGAAATCGGCGCAACACTTCTGGCAGATGCGCGCGTCCGCATGATTACGTTCACGGGCTCGACGCGA
ACGGGTCGCTATCTGGCGGTCGAAGCTGCGCGCAATCTGAAGCGTTTCACGCTTGAAATGGGTGGAAAAAGCCCGCTCAT
TGTTCTGAAGGATGCCGATCTCGATTACGCTGTCGATGCGGCTGCATTCGGTATTTTTCTACATCAGGGCCAAGTCTGCA
TGGCCAACTCGAAGGTCATCGTCGAGGCGCCGCTGTACGAGGAATTCTCAAAGCGCTTCCTCGCCAAGACGGCGAAGATC
AAAGTCGGCGATCCGCGCGATCCCGAAACTGTTGTCGGTCCGCTGATCCGGCGCTCGCAGTGTGAGTTCATCGATGGCCA
CATCAAAGACGCCGTCGATAAAGGCGCGCGCTTACTAACTGGCGGCACCCACGAAGGCGCGTTCTATCAGCCGACGGTGC
TCGCCGGCGTGACGCCCGAGATGCGCATCTATCATGAGGAAAGCTTCGGCCCGGTCGTCTCGCTTATCTCGGTTGGGGAT
TCGGAAGAGGCGCTGCGCGTCGCCAACGATACGGCTTACGGCCTTTCCGCCGCCGTCATCACCAACGATTTGCAGAAGGC
GCTAGATCTTTCCATGCGTCTTGAGTCCGGAATGGTGCATGTCAATGACACGACGATCACTGACGAGCCACACGTTCCGT
TCGGCGGTGTCAAGAACAGCGGTTTCGGCCGTGAGGGCGGTCGCTATTCCATGGAAGAAATGACTGAAGTGAAGTGGATT
ACGCTGCAGATGGGACAGCGTCAGTTCCCATTCTGA

Protein sequence :
MNPNATETIDGLKTYKLFIDGEWVTSKRNEIADDLNPATGEVFARTQQAGGEEVENAIAAAYRANATWGESLAAERETLL
LRVGEVVARRKEEIRDLLIEECGSAFSKALWEIDYVIDLMRSTAGDVRHLFGETMPMTMPGQISMSVRRPLGVIAGIAPF
NSPFLLSMKKIAFALSAGNTFVLKPSEETPISGAIIADVFQEAGLPKGVLNVIPGAPKEIGATLLADARVRMITFTGSTR
TGRYLAVEAARNLKRFTLEMGGKSPLIVLKDADLDYAVDAAAFGIFLHQGQVCMANSKVIVEAPLYEEFSKRFLAKTAKI
KVGDPRDPETVVGPLIRRSQCEFIDGHIKDAVDKGARLLTGGTHEGAFYQPTVLAGVTPEMRIYHEESFGPVVSLISVGD
SEEALRVANDTAYGLSAAVITNDLQKALDLSMRLESGMVHVNDTTITDEPHVPFGGVKNSGFGREGGRYSMEEMTEVKWI
TLQMGQRQFPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-48 41