Gene Information

Name : HYPMC_3229 (HYPMC_3229)
Accession : YP_004677010.1
Strain : Hyphomicrobium sp. MC1
Genome accession: NC_015717
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3099078 - 3099806 bp
Length : 729 bp
Strand : +
Note : -

DNA sequence : 
ATGGATGAGAGTCCGCGAGCCGTTCGACCTGTCGTTTTTCGCGCACGCAAGGTCGCAAAAACCTATGTGATGGGCGAAGT
CGAGGTGCACGCGTTGCGCGATGTCGACATCGATATCTTTGAAGGAGAATTCATCGTTCTTCTTGGCCCGTCTGGCTCTG
GAAAATCCACTCTCTTAAATATCTTAGGCGGCCTCGACTCGCCGACCAGCGGCGAAGCTACGTGGAAAGATCATAATCTA
GTCACGGCCGACGAAGCCGAATTGACGCGGTATCGGCGTGAGCATGTCGGCTTTGTGTTCCAGTTCTACAACCTTATCCC
GAGCCTCACCGTTTGGGAAAACGTCGCGCTCGTGCGCGAGATTGCGACAAAGCCGTTTGATGTTCGCGAGGCGCTCGAAC
TGGTCGGGCTTTCGAAGCGCCTCAACCACTTTCCGTCGCAGCTGTCGGGTGGCGAGCAACAGCGCGTTGCCGTGGCGCGG
GCCATCGCCAAATCACCCGACGTCTTGTTGTGTGATGAGCCTACGGGCGCGCTTGATTGTGAGACCGGTAGGCTTGTTCT
GGCCGCGATCTCGAAAGTAAATGAGCGCCTCGGAACAACTACGATTATCATCACGCACAACGCCGCAATCGCGGGCATGG
CCGATCGTGTCATCCGTCTCGCGGGCGGTCGCATCGAGGGCGTAGAACGCAATGCACGCCGGTTGAAAGCGGAGGAGGTG
ACTTGGTGA

Protein sequence : 
MDESPRAVRPVVFRARKVAKTYVMGEVEVHALRDVDIDIFEGEFIVLLGPSGSGKSTLLNILGGLDSPTSGEATWKDHNL
VTADEAELTRYRREHVGFVFQFYNLIPSLTVWENVALVREIATKPFDVREALELVGLSKRLNHFPSQLSGGEQQRVAVAR
AIAKSPDVLLCDEPTGALDCETGRLVLAAISKVNERLGTTTIIITHNAAIAGMADRVIRLAGGRIEGVERNARRLKAEEV
TW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-28 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-27 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HYPMC_3229 YP_004677010.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-43 52
HYPMC_3229 YP_004677010.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 8e-35 44
HYPMC_3229 YP_004677010.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-31 43
HYPMC_3229 YP_004677010.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-31 42