|
Name : kdpA (HYPMC_3102) Accession : YP_004676885.1 Strain : Hyphomicrobium sp. MC1 Genome accession: NC_015717 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : 3.6.3.9 Position : 2971304 - 2973007 bp Length : 1704 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 6146979; Product type e : enzyme DNA sequence : ATGACACTTATAGGTTGGATCCAGATTGCGCTCTTTTGCGCGATCGTTTTGGCGCTCGTAAAGCCGCTCGGCTGGTATAT GACACGCGTTTTCTCTGGCGAGAAAACATTTCTTTCACCAATCTTGAGCCCGGTCGAAGCCGGTCTCTATAAAATCGCGG GCGTCGACGCACGCGGCGAACAGGATTGGCTGCGCTACACCGTCTCGATGCTGCTGTTTCATATCGGCGGCTTCGTCATT CTCTATGCCGTGCTGCGCTTGCAAGGTGCGCTGCCTTTCAATCCGCAAGGAATGACGGCGCTGGCGCCCGACCTTTCGTT CAACACCGCCATCAGCTTCATCACCAACACGAACTGGCAGAACTACGGCGGCGAGACGACGATGTCGTATTTCACGCAGA TGCTTGGATTGACGCATCAGAATTTTCTGTCGGCCGCAACGGGCATCGTTCTTGCGATCGTCTTGATACGTGGCTTTGCG CGTGCATCGACCAGAAATCTCGGTAACTTCTGGGTCGATGTTACTCGCTGCACGCTGTACATCCTGCTGCCGCTTTGTAT CCCGTACACGTTGTTTCTTGTCTGGCAGGGTATCCCGCAGACGATCGGCGCGTACGTCGATGCGACGACGCTCGAAGGCG CCAAACAGACGATCGCCGTCGGTCCGGTGGCCTCCCAGGTTGCCATCAAAATGCTCGGCACCAATGGCGGTGGTTTCTTC AATGCCAACGCCGCACATCCGTTCGAGAATCCGACCGCGCTCTCGAATTTCGTCCAGATGATCTCCATTTTTGCGCTCGG CGCTGCGTTGACGAACGTCTTCGGTCGCATGGTCGGCAACCAGCGCCAAGGCTGGGCCATCCTCGCCGTTATGGGCGTGC TTTTCATTGCCGGCGTTGCGGTCTGTTACTGGGCCGAAGCCAACGGCACCACCGGCCTCAACGCACTCGGCCTGACAGGT GGCAACATGGAAGGCAAGGAAACCCGCTTCGGTATCGTGGGATCGGCCTTGTTCGCAGTCATTACGACGGCCGCATCCTG CGGCGCCGTCAATGCCATGCATGACTCCTTCACGGCCCTCGGCGGAATGATCCCGCTCGTGAATATCCAACTAGGCGAAA TCATCGTCGGCGGCGTCGGGGCAGGGCTTTACGGCATGTTGCTGTTCGTCGTCCTCGCAATCTTCGTTGCCGGACTGATG GTTGGCCGCACGCCCGAATACGTCGGCAAGAAGATCGAAGCGAAAGAAGTCAAGATGGCCATGCTCGCCATATTGATCCT GCCGCTGATGATCCTCGGCTGGACTGCTGTCGCCGCGGTGCTCCCGTCCGCATTAGCCTCCATCGCCAACCCCGGTCCGC ACGGCTTCTCTGAGATCCTGTATCTCTTCTCATCGAGCACCGGAAACAATGGCTCCGCCTTCGCGGGCATCACGGGCAAC ACATTCTTCTACAACGTAACGGGCGCGATCTCGATGTTTGTTGGGCGCTTCCTGATGATCGTGCCGGCGATGGCGATCGC AGGCGCGTTGGCAGAGAAGAAGACGCTCGCACCTTCTGTCGGAACGTTCCCAACCACCGGCGGACTTTTTGTCGGCCTCG TCGTTGGCGTCATCCTGATCGTTGGCGGACTGACGTTCTTTCCCGCGCTCGCACTCGGGCCCATCGTCGAGCACCTCGCG ATGACGGCCGGCACGCTCTACTGA Protein sequence : MTLIGWIQIALFCAIVLALVKPLGWYMTRVFSGEKTFLSPILSPVEAGLYKIAGVDARGEQDWLRYTVSMLLFHIGGFVI LYAVLRLQGALPFNPQGMTALAPDLSFNTAISFITNTNWQNYGGETTMSYFTQMLGLTHQNFLSAATGIVLAIVLIRGFA RASTRNLGNFWVDVTRCTLYILLPLCIPYTLFLVWQGIPQTIGAYVDATTLEGAKQTIAVGPVASQVAIKMLGTNGGGFF NANAAHPFENPTALSNFVQMISIFALGAALTNVFGRMVGNQRQGWAILAVMGVLFIAGVAVCYWAEANGTTGLNALGLTG GNMEGKETRFGIVGSALFAVITTAASCGAVNAMHDSFTALGGMIPLVNIQLGEIIVGGVGAGLYGMLLFVVLAIFVAGLM VGRTPEYVGKKIEAKEVKMAMLAILILPLMILGWTAVAAVLPSALASIANPGPHGFSEILYLFSSSTGNNGSAFAGITGN TFFYNVTGAISMFVGRFLMIVPAMAIAGALAEKKTLAPSVGTFPTTGGLFVGLVVGVILIVGGLTFFPALALGPIVEHLA MTAGTLY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 1e-73 | 47 |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 8e-74 | 47 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 6e-57 | 42 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 6e-57 | 42 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 4e-57 | 42 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 6e-57 | 42 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 6e-57 | 42 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 3e-57 | 42 |
