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Name : gspE (HYPMC_3008) Accession : YP_004676793.1 Strain : Hyphomicrobium sp. MC1 Genome accession: NC_015717 Putative virulence/resistance : Virulence Product : general secretory pathway component, cryptic Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2872872 - 2874533 bp Length : 1662 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 96256608; Product type t : transporter DNA sequence : ATGAGTGGTAGCTTCGAAGAATTCCTTCTCAGCGAGCGCCTCGTTACGCAGAGCGACATCGATAGCGTCGCGAAGTTTCG GCAGGAAACCGGCGCCTCTATCTTCTCGGCCTTGCGCAAGGCCTCCGGCGTCCAATCACAGGTTTTGGTTCGCGCTATTG CTGATTACCACAGGGTTCCTCGCGTGGATGAAGCGGAGTGGACGCGGTATCCTCCCATACGGGCCAATCTCTCGCCGGCC TTCCTACGTGAGAACAAAGTCTGCCCCCTGGGAGAGACCGAGGATGGCGTCCTTGTGGCCATGGAGGATCCCTCCGATGT CCAATCGATCAATGCGCTGCGCATCGCGCTAGAAAAAGAAATCCTTCCGCGCGTCGCTGCGGCGGAAGACATCCTCGCCG CTATCGAACGCGCCGTTCGGGAACGTGGCACTGCCACCATTTGGCAAGACGTCGGCAATGCAGAAGCCGGCGCGGACGAC GTTGAACACCTACGCGACATGGCACTCGGCGCACCGGTGGTCCGCTATGTCAACCAGATGATCCAGCACGCCGTGCATGC GCGAGCGACCGACATTCACATCGAGCCATTTGATGGTCGCGTTGCGATCAGGATCCGTGTCGACGGTATGCTGCGAGACG TCTCGCCGCCGCCGGCCCAGATGTCGAAGGCTGTCGTGTCGCGCGTAAAAATTCTTTCGGGTCTAAACATCGCCGAACGC CGCCTTCCTCAGGATGGCCGTGCCAGAATTCGCATCAATGAACATCGGCTGGATCTGCGCATCGCAACGATTCCGACCAT TCACGGCGAGGCCGTAGCGATCCGCCTTCTCGACAATGTGAGGCGCATGCTCGATTTTGCGCCGCTAGGCTTCAATGCTC GAGACGAAGCGGAAATCCGAAAGCATCTATCGGCGCCTTATGGTTTGATGTTGGTTACCGGACCGACCGGCTCGGGAAAA ACCACGACGCTGGCAACCGCGCTATCTCTACTCAATAAATCTCATCGGAAGATCCTTACAATCGAGGATCCGATCGAATA CGAACTCGACGGCGTCAACCAAACTCAAGCGAAGCCCTCGATTGGATTGACGTTCGCGGATGCGCTGCGTTCATTTCTTC GTCACGATCCCGACGTCCTAATGGTGGGCGAGATGCGCGATGGTGAAACTGCGAGCATTGCGATCCACGCAGCACTGACC GGCCATCTCGTGCTGTCAACATTGCATACAAATACCGCCGCGGGCGCGGTTCCGAGGCTTCTCGACATGGGCATCGATGC CTTCCTTCTTGCATCATCACTCAGGTGCGTGATCGGCCAGCGGCTGGTTCGCGTTCTATGCGACCACTGCAAACGGCCAT CTCGTGAACCGCTGTCTCTCGGGCGAGGTGGTTCAGAGGTCCGCGCCGAAGATCAGCATTGGGAAGCAGTCGGTTGCGAG CGATGTTTCGGCACTGGATATGCCGGCCGTATCGTTATCGCCGAAGTGCTCAGCATCGATGACGAGATTCGAAATCTCAT CCGACCGGATGCTCAAATGGCACAGATCGAAGCCTTGGGACGCAGCAAGGGCATGACCACGATGATCATGGATGGTCTTG CGAAGTGCCGATCCGGCAAGACAACACAGGAAGAAGTTCGGCGGGTCGCACTCGACATCTAA Protein sequence : MSGSFEEFLLSERLVTQSDIDSVAKFRQETGASIFSALRKASGVQSQVLVRAIADYHRVPRVDEAEWTRYPPIRANLSPA FLRENKVCPLGETEDGVLVAMEDPSDVQSINALRIALEKEILPRVAAAEDILAAIERAVRERGTATIWQDVGNAEAGADD VEHLRDMALGAPVVRYVNQMIQHAVHARATDIHIEPFDGRVAIRIRVDGMLRDVSPPPAQMSKAVVSRVKILSGLNIAER RLPQDGRARIRINEHRLDLRIATIPTIHGEAVAIRLLDNVRRMLDFAPLGFNARDEAEIRKHLSAPYGLMLVTGPTGSGK TTTLATALSLLNKSHRKILTIEDPIEYELDGVNQTQAKPSIGLTFADALRSFLRHDPDVLMVGEMRDGETASIAIHAALT GHLVLSTLHTNTAAGAVPRLLDMGIDAFLLASSLRCVIGQRLVRVLCDHCKRPSREPLSLGRGGSEVRAEDQHWEAVGCE RCFGTGYAGRIVIAEVLSIDDEIRNLIRPDAQMAQIEALGRSKGMTTMIMDGLAKCRSGKTTQEEVRRVALDI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-71 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-71 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_004676793.1 | general secretory pathway component, cryptic | VFG0182 | Protein | 4e-74 | 45 |
| gspE | YP_004676793.1 | general secretory pathway component, cryptic | VFG2048 | Protein | 4e-72 | 44 |
