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Name : gabD (HYPMC_2756) Accession : YP_004676541.1 Strain : Hyphomicrobium sp. MC1 Genome accession: NC_015717 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 2606643 - 2608097 bp Length : 1455 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8297211; Product type e : enzyme DNA sequence : ATGAATATCAAATCGTCAACGCCCTTCCCCTCGGCCGCCTTCATAGACGGCGAGTGGGTGACTTCGAACAAGACGTTTCC GGTTCTCGATCCGGCGACGGGCGAAAAGCTCGTTGATGTACCGGACCTGACACCGGATGATGCCAAGCGCGCCATCGACG CCGCGCACAAGGCATTTCCGGCGTGGGCTGCGAAGCCCGCGAAGGAACGCGCGCAGATCCTGCGCAAGTGGTTCGACCTC ATCATCGCGGACACCGAAGCGCTGGCTCAGTTGATGACGGCCGAGCAAGGCAAACCGCTGACGGAATCGCGCGGCGAAGT CGCTTATGGCGCGTCGTTCATTGAATGGTTCGCGGAAGAAGGAAAGCGCGCCTACGGGCACACGATCCCGACGACGGTCG CGTCGCGCCGCTACCTCACGATCAAGCAGCCCATCGGCGTATGCGCGGCGATCACGCCGTGGAACTTCCCGATCGCGATG ATCACCCGCAAGGTCGGCTGCGCCCTGGCTGCCGGTTGCACGATCGTCGTGAAGCCGTCAGAAGAGACGCCGCTATGTGC GCTGGCGCTTGCGAAGCTCGCGCAGGACGCAGGCGTTCCGGCGGGCGTATTCAACGTCATCACGACGATGGACGGCCCGG GCATCGGCAAGGTGCTGACGGCGGATGACCGTGTGCGCAAGTTGACGTTCACAGGCTCGACGGAAGTCGGCCGCATTCTC TATCGTCAGTGTGCCGACACCATCAAAAAGCTGACGCTCGAACTCGGCGGCAACGCGCCGCTCATCATTTTCGACGATGC CGATCTGAAGCAGGCGGTCGCCGGAACGATGGCGTCGAAGTTCCGGAACGCGGGCCAGACGTGCGTCTGCGCCAACCGTA TCCTCGTGCAGGCGGGCATCTTCGACAAGTTCGTTGCAGCCCTGAAAGAGGAAGCCGCGAAGCTCGTCGTGGCACCCGGC CGTGATGCCAAATCGACGGTCGGACCGCTGATCAATGCGGAAGCCATCGACAAGGTGAAGTCGCTGCTTTCCGGTGCGGT CTCCGAAGGCGCCAAGATCGAGATCGGCGGCAAGCCGGACAAACACGGCGCGCTTTTCTTCGAGCCGACCATCGTGACCG GTGTCACCACCGCCATGACGATCGCGAACGAAGAGATCTTCGGGCCGGTCGCCTCGCTCATCAAATTCGAGACGGAAGCC GACGCGATCCGCATCGCCAACGGCACGCCGTTTGGCCTCGCGGCTTACCTCTTCAGCCAGAATGTCTCTCGCGCGTGGCG CGTGGCTGAAGCACTCGAAGCCGGCATGATCGGCGTCAACGAAGGCGTGTTCTCGAACGAGGTCGCGCCGTTCGGCGGCA TCAAGCAGTCGGGTCTCGGCCGCGAGGGCGCGGACGAAGGCCTCAACGAGTATCTCGAGACAAAAATGATCGCCCTTGGC GGCATCAACGCCTAG Protein sequence : MNIKSSTPFPSAAFIDGEWVTSNKTFPVLDPATGEKLVDVPDLTPDDAKRAIDAAHKAFPAWAAKPAKERAQILRKWFDL IIADTEALAQLMTAEQGKPLTESRGEVAYGASFIEWFAEEGKRAYGHTIPTTVASRRYLTIKQPIGVCAAITPWNFPIAM ITRKVGCALAAGCTIVVKPSEETPLCALALAKLAQDAGVPAGVFNVITTMDGPGIGKVLTADDRVRKLTFTGSTEVGRIL YRQCADTIKKLTLELGGNAPLIIFDDADLKQAVAGTMASKFRNAGQTCVCANRILVQAGIFDKFVAALKEEAAKLVVAPG RDAKSTVGPLINAEAIDKVKSLLSGAVSEGAKIEIGGKPDKHGALFFEPTIVTGVTTAMTIANEEIFGPVASLIKFETEA DAIRIANGTPFGLAAYLFSQNVSRAWRVAEALEAGMIGVNEGVFSNEVAPFGGIKQSGLGREGADEGLNEYLETKMIALG GINA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-135 | 60 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-92 | 44 |
