Gene Information

Name : HYPMC_1803 (HYPMC_1803)
Accession : YP_004675598.1
Strain : Hyphomicrobium sp. MC1
Genome accession: NC_015717
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3666
EC number : -
Position : 1708331 - 1709545 bp
Length : 1215 bp
Strand : +
Note : -

DNA sequence :
GTGCAGTCCTCTCGTGGCCTCGAGCGCGAGTGCGGGAGGAACTTGGAGCTGATCTGGCTCAAGGGTCGCTTGGCACCCGA
CTTCAAGACGATCGCCGACTTCCGGCGCGACAACGGTCCAGCCCTTCGCAAGGTATGCCAACAGTTCGTCGCCCTTTGCC
GCGGCATCGATCTCCTGGATGCCAGCATCGTCGCAATCGAAGGGAGCAAGTTCAAAGCTGTCAACGCGAAGACGAAGAGC
TTCACGCGCGAGAAGCTGAAACGTTGCCTTGGAGAGATTGATGCGGTCATCGAACGGTATCTCGTCGAGCTTGACCGTGC
TGATGAGGTGTTGAGCAAGACCGACATGTCAGTGCCGATGGCTCGGCTTGAGCGTGCGATCAAGAAGCTGGCCTACTGCA
GACGAGAGGCCAATGCCTTGAAAGCAATTGAGCGGCGCACGGACAGCAGCGGAGAGACGCAGGTCTCGTTGACCGATCCC
GATGCCCGCGGCATGGCGACGACGAGCAGGAAACCCCGTGTGGTTGGCTACAATGTGCAAAGTGCAGTCGAGACGAAGCA
TCACCTGATCGTCGCGCACGAGGTGACGAACCTCGGCTACGATCGAGACGCCTTGGCAATGATGGCGCGTGCGGCGCGGG
AGGAGATGTCCTGCGATGACATCGAGGCTGTCGCCGACAAGGGCTACCACAAGGGTGAGGAGATCGTGGCGTGCGAGGAG
GCCGGTATCCCGGTCACTGTGCCTAGGCCGCACACCTCGAATGCAGCCGCCCATGGACGCTTCGATCGAGCTGACTTCAC
CTATGTTGCCGGCGAGGATGCCTATGTGTGTCCAGCCGGTGCGCGCCTGACGTACCGCTTCACGAACACCGAGGCCGGGA
AGACGCTGCACTCGTACTGGACCGATGCCTGTGGAAAATGCGCCATCAAAGGCCGGTGCACCACCAGCAAGGAACACCGC
GTGCGTCGCTGGGAGCACGAGGGCATCCTAGAGCGCGTTCAGCAGCGCCTCGACGATGATCCCAACAAGATGTCGCTACG
GTACCAGACCGTCGAGCATCCCTTCGGGACGATCAAAGCGTGGATGGGCGCCACTCACTTCAAAATGAAAACGCTGAAGC
ACGTCGCTACCGAGATGGCGCTGCACGTTCTGGCCTACAATTTGAAGTGGGTGATGGCGATCCTGGGAGTGCCGAAGCTG
CTCGGGGCGATGTGA

Protein sequence :
MQSSRGLERECGRNLELIWLKGRLAPDFKTIADFRRDNGPALRKVCQQFVALCRGIDLLDASIVAIEGSKFKAVNAKTKS
FTREKLKRCLGEIDAVIERYLVELDRADEVLSKTDMSVPMARLERAIKKLAYCRREANALKAIERRTDSSGETQVSLTDP
DARGMATTSRKPRVVGYNVQSAVETKHHLIVAHEVTNLGYDRDALAMMARAAREEMSCDDIEAVADKGYHKGEEIVACEE
AGIPVTVPRPHTSNAAAHGRFDRADFTYVAGEDAYVCPAGARLTYRFTNTEAGKTLHSYWTDACGKCAIKGRCTTSKEHR
VRRWEHEGILERVQQRLDDDPNKMSLRYQTVEHPFGTIKAWMGATHFKMKTLKHVATEMALHVLAYNLKWVMAILGVPKL
LGAM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA ACY75519.1 transposase Not tested Tn6060 Protein 2e-105 56
tnpA ACY75536.1 transposase Not tested Tn6060 Protein 2e-105 56
unnamed CAD91340.1 hypothetical protein Not tested Not named Protein 2e-105 56
ORF SG74 AAN62296.1 transposase domain protein Not tested PAGI-3(SG) Protein 2e-104 56