Gene Information

Name : pss (HYPMC_1768)
Accession : YP_004675565.1
Strain : Hyphomicrobium sp. MC1
Genome accession: NC_015717
Putative virulence/resistance : Virulence
Product : Exopolysaccharide production protein PSS
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 1673148 - 1673831 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGGCCTTTCTCAATCGTCCTCAGTCTTTGTCTTTTTCCGGTGCCGAACTTGCGTCGTCGCCGAGCGCCAACACTCTTGG
AATTCAACTTGCAATTAAGCGCGCGGTCGATGTTTTCGCCGCGTCAACACTGATCGTTGTGGCGTCGCCGATCCTTCTTG
GAGCGGCGCTGGCAATCAAACTGACATCGCGCGGACCGATCTTGTTCAAGCAATCTCGCTACGGTTTGAACAACGAGCTT
TTCGGTATCTACAAATTTCGCAGCATGCGAATTGATTTGGGGGATGCCACAGGCGTCAGACAAACCAAAGCTGACGATCC
GCGCGTCACAAGTGTTGGAAAAATCCTTCGCCGCACCAATATCGATGAATTGCCGCAACTCTTCAACGTTCTGTTCGGCG
ACATGTCTCTTGTCGGACCTCGTCCGCATGTTCCTGGAATGCGTGCGGGCGGTCTACTCTATGAGGAGCTTGTTCCTCAT
TACTTCAAGCGTCATCGCATGCGTCCCGGAATTACCGGCTTGGCTCAAATCAATCGATTAAGGGGCAGCACGACGGACGC
AAAATTCGCCAAGGCGCGTATAGAATACGATCTCGCCTATGCTGAGAGCTGGTCTCTTTTTCTGGATTTTCGGATCCTTT
GGCAAACTTTCAAATCTGAGGTGTTCCGCGGCACCGGGAGCTGA

Protein sequence : 
MAFLNRPQSLSFSGAELASSPSANTLGIQLAIKRAVDVFAASTLIVVASPILLGAALAIKLTSRGPILFKQSRYGLNNEL
FGIYKFRSMRIDLGDATGVRQTKADDPRVTSVGKILRRTNIDELPQLFNVLFGDMSLVGPRPHVPGMRAGGLLYEELVPH
YFKRHRMRPGITGLAQINRLRGSTTDAKFAKARIEYDLAYAESWSLFLDFRILWQTFKSEVFRGTGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 5e-24 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pss YP_004675565.1 Exopolysaccharide production protein PSS VFG1309 Protein 3e-25 45