Gene Information

Name : glnA (HYPMC_1290)
Accession : YP_004675095.1
Strain : Hyphomicrobium sp. MC1
Genome accession: NC_015717
Putative virulence/resistance : Virulence
Product : glutamine synthetase type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1215671 - 1217080 bp
Length : 1410 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2882477; Product type e : enzyme

DNA sequence :
ATGAAAAATGCAAATGACGTCCTGAAATTCATCAAGGACAAGGAAGCGAAGTTCGTGGATTTCCGATTCACGGACACCAA
GGGCAAGATGCAGCACGTCACGGCCGACGTCAGCTGCGTCGATGAAGGCGTCTTCTCTGATGGTTATGCCTTCGACGGGT
CTTCGATCGCCGGGTGGAAATCGATCGAAGCCTCCGACATGACGCTGATGCCGGATCCGGCAACGGCTCACGTCGATCCG
TTCTTCGCCCAGACGACCGTCGCGATCTTCTGCGACGTTCTCGAACCCTCAACCGGCCAACCCTATGAGCGCGACCCGCG
TTCGGTCGCCAAGAAGGCCGAGGCCTACATGATGTCGCTCGGCATCGGCGACAAAGTCTATTTCGGACCGGAAGCCGAAT
TCTTCATCTTCGACGACGTCCGCTTCACCACTGACATGTATTCGATGGGCTATCAGATCGACTCCAGCGAGCTGCCCTCG
AACACCGGTACGATCGTTGAATCCGGCAACCTCGGCCACCGTCCGCGCGTGAAGGGCGGCTATTTCCCGGTCCCGCCGAT
CGACAGCGCTCAAGACATCCGCTCCGAGATGCTCTCAGTCCTTTCGGAAATGGGCGTCACCGTCGAAAAGCACCACCACG
AAGTCGCTGCTGCCCAGCATGAGCTCGGCGTGAAGTTCGGCCCGATGATCACGATGGCCGATCACATGCAGATCTATAAG
TACGTCGTGCACAACGTGGCCCAGGCCTACGGCAAAACGGCGACGTTCATGCCGAAGCCGGTCTTCGGCGACAACGGCTC
GGGCATGCACGTTCACCAGTCGATCTGGAAGGGCGGCCAGCCGATGTTCGCCGGCGACAAGTACGCCGACCTCTCGCAGA
TGTGCCTCAACTACATCGGCGGCATCCTGAAGCACGCGAAGGCGATCAACGCTTTCACCAATCCGCTGACCAACTCATAC
AAGCGCTTGGTGCCGGGCTTCGAGGCGCCTGTGTTGCTGGCCTATTCGGCGCGCAACCGCTCGGCTTCGTGCCGCATTCC
GCACGTTTCAAGCCCCAAGGCCAAGCGCATCGAAATCCGCTTCCCGGATCCGGGCGCCAACCCCTACTTCGCATTCACGG
CGATGTTGATGGCTGGCCTCGACGGCATCCAGAACAAGATCGATCCGGGTCCCGCCATGGACAAGAACCTCTACGATCTG
CCGCCGGCTGAGCTGGCGAAGATCCCGACGGTATCGGCTTCGCTCCGCGAAGCGCTCGACAGCCTCGACAAGGACCGCGA
CTTCCTGAAAGCGGGCGGAGTCATGAACGACGACATGATCGACGCCTACATCGCGCTGCGCATGGAAGAGAACATGCGTT
ACGAGATGACGCCGCATCCGGTCGAGTTCGACATGTACTACTCGGTCTGA

Protein sequence :
MKNANDVLKFIKDKEAKFVDFRFTDTKGKMQHVTADVSCVDEGVFSDGYAFDGSSIAGWKSIEASDMTLMPDPATAHVDP
FFAQTTVAIFCDVLEPSTGQPYERDPRSVAKKAEAYMMSLGIGDKVYFGPEAEFFIFDDVRFTTDMYSMGYQIDSSELPS
NTGTIVESGNLGHRPRVKGGYFPVPPIDSAQDIRSEMLSVLSEMGVTVEKHHHEVAAAQHELGVKFGPMITMADHMQIYK
YVVHNVAQAYGKTATFMPKPVFGDNGSGMHVHQSIWKGGQPMFAGDKYADLSQMCLNYIGGILKHAKAINAFTNPLTNSY
KRLVPGFEAPVLLAYSARNRSASCRIPHVSSPKAKRIEIRFPDPGANPYFAFTAMLMAGLDGIQNKIDPGPAMDKNLYDL
PPAELAKIPTVSASLREALDSLDKDRDFLKAGGVMNDDMIDAYIALRMEENMRYEMTPHPVEFDMYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-107 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_004675095.1 glutamine synthetase type I VFG1399 Protein 8e-111 52