Gene Information

Name : smpB (HYPMC_1167)
Accession : YP_004674972.1
Strain : Hyphomicrobium sp. MC1
Genome accession: NC_015717
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 1132193 - 1132666 bp
Length : 474 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 10393194, 7524073; Product type f : factor

DNA sequence :
ATGGCATCCAAACGCGACGACGGCACCACGCTTGTCGCCGAAAATCGCAAAGCGCGGCATGAGTACTTCATCACCGATAG
CTGGGAAGCGGGTATCGAGCTTCTCGGCTCCGAGGTGAAGTCTCTGCGGCGTGGCCAATCGAATATCGCGGAAAGCTATG
CCTCGGTCGAGGACGGCGGGATCTGGCTGATCAACAGCTACATCGCCGAATATCCGGGCGCAGCGCTGTTCCCGCATGAG
CCGAAGCGCAAGCGCCGGCTGCTGATGCATGCCACCGAAATTCATAAGATCGGTATTGCGATCGAGCGCAAGGGCATGAC
GCTGGTGCCCTTGGAGCTTTATTTCAACGAGAAAGGCCGCGCCAAGATCAAGCTGGGCTTAGCGCAGGGCAAGAACCACG
CGGACAAGCGGCAGGACGCCGCGAAACGCGATTGGAATCGGCAAAAAGCGCGCCTCATGCGCGAAAAGGGCTGA

Protein sequence :
MASKRDDGTTLVAENRKARHEYFITDSWEAGIELLGSEVKSLRRGQSNIAESYASVEDGGIWLINSYIAEYPGAALFPHE
PKRKRRLLMHATEIHKIGIAIERKGMTLVPLELYFNEKGRAKIKLGLAQGKNHADKRQDAAKRDWNRQKARLMREKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-24 47
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 4e-23 44
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 1e-27 42