Gene Information

Name : pyk (SNE_A08670)
Accession : YP_004671235.1
Strain : Simkania negevensis Z
Genome accession: NC_015713
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 901666 - 903474 bp
Length : 1809 bp
Strand : +
Note : -

DNA sequence :
ATGGCAATGGCGCGCACGAAAATCATTTGTACGATGGGGCCTGCGGTCTCAGACTACAACAAAATCCTAGAGCTTATTGA
TGCTGGGATGAATGTAGCACGGCTTAATATGAGCCATGGAAATCACGAGCAGCATCGTGAAATGATTCGAATGCTAAAAA
AAGCTCGCGCAGAAAAAGGGGTGCCTCTCGCTATCATGCTTGATACGAAAGGGCCTGAAATTCGCGTTGGAAAGATCAAA
GGGGATGCGATAGCCCTCAATAAAAAGCAGACATTGAAGATCATGCGTGGAGAGATCGAAGGATCAGATGAGGGAATTAG
CTTTCTTCCACCCACGATTGTCGATGACATCCCTCTCCACGCTACAGTTCTTTTTGATGATGGTTACATCAACTCACACG
TGATTGAGAAAACCAAAAAAGGAATCGTCGTCGAAATTCAAAATAATGGTGTCCTCCGGAGTCAAAAAGGGGTAAACATT
CCTCATGCCGCACTCAATCTTCCTGCAGTGACGCAGCAAGACATTCAAGATATTATCTTCGGATGTGAGGAAGAGGTGGA
TCTTTTAGCAGCTTCGTTCATTCGGAATGCCGATCACATTCTCGAAATTAAGAAGCTTTTAACTCAGCACCAAAAAACCC
CCATTCTTGTCATTGCTAAAATTGAAAATGCTTTGGGGGTAAAAAACTTTGATAGCATTTTGCAAGCAGCAGATGGAATC
ATGGTAGCAAGAGGCGATCTTGGAGTTGAATTGCCCATCACACAAGTTCCTAAACTTCAAAAAATGATGATTCGCAAGTG
CTACCAATCTTTCAAGCCTGTCATTACAGCCACGCAAATGCTCGAATCGATGATCGAAAACCTCCGTCCAACTCGCGCAG
AGGTTTCTGATGTAGCCAATGCCATATATGACAGTACTTCAGCCGTGATGCTATCGGGAGAAACAGCTATTGGAAAATAT
CCTGTCGAAACGGTGCGCCTCATGCGCAGTACAATTTTAGCCACTGAAAAAGACTTCAAGTATGAAGAATTTTTCTATAA
TGATGTGGCAAGACGTGTTTTTAATGATATATCCTCTTCTGTTGCTCTTGCCGCTGTTAAAACAGCTTATGCAGGGAATG
GAAAAGCCCTCATCGCTTTAACGACCAGTGGATTTACAGCGCGGGTCATGGCCCGTTTTCGCCCCAAAATGCCAATTATT
GCTATCACACCTAAGGAACGGACCTACCACCAGCTGGCGTTTGTTTGGGGAATCACTCCGGTTCATGCATCTGTCGAAAA
TGTGAAGCAAGGAATGGCGAAAGCCAGTTGCTTTGCCTTGCAGCATAAGATTCTTCACTATGGTGACCTTATCGTGGTGA
CATCTGGCTCTCCCTTTGGAGTGAGTGGAACCACGAACATGATGCTTGTCGACAACATCGGAGATGTACTTGTCCGCGGG
ATGATAGGAGAAGGGAGAAAAGTTCATGGGAAGGTAAAGGTCATTCTCAGTTTCGACCCCGAAGCGACCTATAAGATCAA
AGATCGGCTCGTTGTGATTCCTCACTGCCATGAAAAGTATAAACATTTCTTAAAAGGGGCTGCAGGTATCATATTGCAAA
ACCATCCAGACGATTGTCATTCCGAACAGATGGGAAGATTGATCGCCCATGACCTAAAAATCCCTATTCTTCTCAGAGCC
GATGCAGCTTGCACCATCCTCAAAGACGATCAAATGGTCACTCTCGACCCCAATAAGGGGCTTGTCTTCGAAGGGATCGT
TGAATCAGAAGATGAAATGCTGACCCAAGTCTGCAAGATTCCGCATTAA

Protein sequence :
MAMARTKIICTMGPAVSDYNKILELIDAGMNVARLNMSHGNHEQHREMIRMLKKARAEKGVPLAIMLDTKGPEIRVGKIK
GDAIALNKKQTLKIMRGEIEGSDEGISFLPPTIVDDIPLHATVLFDDGYINSHVIEKTKKGIVVEIQNNGVLRSQKGVNI
PHAALNLPAVTQQDIQDIIFGCEEEVDLLAASFIRNADHILEIKKLLTQHQKTPILVIAKIENALGVKNFDSILQAADGI
MVARGDLGVELPITQVPKLQKMMIRKCYQSFKPVITATQMLESMIENLRPTRAEVSDVANAIYDSTSAVMLSGETAIGKY
PVETVRLMRSTILATEKDFKYEEFFYNDVARRVFNDISSSVALAAVKTAYAGNGKALIALTTSGFTARVMARFRPKMPII
AITPKERTYHQLAFVWGITPVHASVENVKQGMAKASCFALQHKILHYGDLIVVTSGSPFGVSGTTNMMLVDNIGDVLVRG
MIGEGRKVHGKVKVILSFDPEATYKIKDRLVVIPHCHEKYKHFLKGAAGIILQNHPDDCHSEQMGRLIAHDLKIPILLRA
DAACTILKDDQMVTLDPNKGLVFEGIVESEDEMLTQVCKIPH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 5e-70 42
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 5e-70 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 5e-70 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-69 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_004671235.1 pyruvate kinase VFG0479 Protein 2e-70 42