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Name : serS (SNE_A05450) Accession : YP_004670913.1 Strain : Simkania negevensis Z Genome accession: NC_015713 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 574159 - 575457 bp Length : 1299 bp Strand : - Note : - DNA sequence : ATGATCTCTTGCGAAAGGAGATTTTTGATGCTTGATATAAAACTTATTCGAAATGACCCCAAAGGGATTGAAGCTAAGCT AAAAACAAAAGACCCAGCGGTTTCAATTGCTCCTATTTTGAAACTCGATGAAGAGATCCGTCAAATAAAAAATCAAGTCG AGCAATTAAAAAATCAAAAAAATCAAAATGCCAAGCAAATTGGTGAAAAAAAACGCAAAGGAGAAGATGTCTCCAAACTC ATGGAAGAAATTGCCGGTGTAGGAGATGAAATCCAAAAACTTGATCATCAGTTAATGGAGCTTGAAAAAGCCTTTCATGA TCATGTGGCTTGTTTCCCGAACCTCCCTATGGAAGACATCAAAAACTCACTCGACCCTGCTGATAACGTCTGCATCAAAA CTTTTGGAGAAAAACCCTCTTTTTCTTTCGAGCCCAAAAATCACATGGAACTCAATGAGAAGCTGAAGCTGTTTGACTTT AAACGGGGCGCTAAAATTGGAGGAACAGGTTGGCCTTGTTACCGTGGACTGGGTGCACGCCTTGAGTGGGCTCTCATTCA ATTCATGATCGACACCCACATTACAAACGGGTTTGAAATGTGGATTCCTCCTCTCGTTGGCCGTCCTGAAATCATGTACG GTTCGGCTCATTTGCCCAAATTCGAAGACCAGCTTTATAAAGTACACGACGATGATTACCACCTCTACCTGATTCCTACT TCTGAAGCAGTCTTAAACGGACTCCACTTCGATGAGATTCTCGAAGAAGAATCGCTCCCGCGCAAATACACGGCGTTCAC TCCCTGTTTCAGACGTGAAGCAGGTGCCGCCGGCTCGCAAGAACGGGGTCTCATCCGAACGCACCAATTCAATAAAGTCG AAATGTTTTGCGTGACACGCCCTGAAGAAAGTGAAGCCATTTATGAAGAGATGCTGAAGAGTGCTGAAGAGATTTTGCAA GCGCTTAACGTTCATTACCGAAGCATGCTACTTGTCACTGGTGACATGTCGTTTGCCTCGGCTAAAACAATTGATTTAGA GGTTTGGCTTCCTGGACAAAATCGTTACTACGAAGTTTCTTCTATTTCTAATTGCACCGACTTTCAAGCACGCCGTGCGA AAATCCGGTATAAAAAGGGAACTGACAAACCACAGTTTTGCCATACGCTCAATGGTTCAGGACTTGCGACTTCTCGCCTC ATGGTCGCACTTTTAGAAAACAACCAGCAAGAAGATGGAACTATCCTCTTGCCTACAGTTTTGCACAAATACTTAGATGG AATGAAATCGATTGGTTAA Protein sequence : MISCERRFLMLDIKLIRNDPKGIEAKLKTKDPAVSIAPILKLDEEIRQIKNQVEQLKNQKNQNAKQIGEKKRKGEDVSKL MEEIAGVGDEIQKLDHQLMELEKAFHDHVACFPNLPMEDIKNSLDPADNVCIKTFGEKPSFSFEPKNHMELNEKLKLFDF KRGAKIGGTGWPCYRGLGARLEWALIQFMIDTHITNGFEMWIPPLVGRPEIMYGSAHLPKFEDQLYKVHDDDYHLYLIPT SEAVLNGLHFDEILEEESLPRKYTAFTPCFRREAGAAGSQERGLIRTHQFNKVEMFCVTRPEESEAIYEEMLKSAEEILQ ALNVHYRSMLLVTGDMSFASAKTIDLEVWLPGQNRYYEVSSISNCTDFQARRAKIRYKKGTDKPQFCHTLNGSGLATSRL MVALLENNQQEDGTILLPTVLHKYLDGMKSIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-76 | 43 |
