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Name : kdsB-A (SNE_A02600) Accession : YP_004670628.1 Strain : Simkania negevensis Z Genome accession: NC_015713 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 271581 - 272309 bp Length : 729 bp Strand : + Note : - DNA sequence : ATGAAAGTTGTTTGTGTGATTCCAGCGCGTCTCAACTCCAAACGTTTTCCTCGAAAGGTGCTCAGCCGTTTAGGTTCTAG ACCTTTGCTCGAATGGGTTTGGGAAGCGGCGACTGCATGCCCTATCTTCGATCAAGTGGTCTTTGCTGTTGATCATGAAG AGACAGCTCGCCTCGTCCAATCGTTTCAAGCAGAATACTTTATGACTTCTGAAACTTGCCCAAGCGGAACTGATAGGCTC ATTGAGCTCATGGATTCAGGGTTACTTGAAGGAGATATTTGGGTGAATTGGCAAGGAGATGAGCCGTTCATCAATCGTGA GATGATCGATGACCTTTTGCAATCGGTTTCAGAAGATTCATCTGATGTTTGGACACTTAAGAAAAAACTTACAGCGGATG CAGAGATTCAAAGTCCACATGTTGTCAAAGTGGTAACAGATTTGAAAGGTCAAGCTCTTTACTTTTCTCGTTCGCCTATT CCTTATGCTCGGATAGAAGGTCCAACTTATTACAAACATATCGGCCTTTATGCTTATAAAACTGAAAGCTTAAAGCGGAT TCAAAAAATGGTTCCTACTCCACTTGAAAAAGCCGAGTCTTTAGAACAACTCCGATTTATGGAAGGGGGGCTCAAAATAA AAATTCACGAAACGGTTCATGACACGCAAGGGATTGATGTTCCAGAAGACCTTCTCCTAGCGCTCAGGCTGATTACGCAA TTCAAATAA Protein sequence : MKVVCVIPARLNSKRFPRKVLSRLGSRPLLEWVWEAATACPIFDQVVFAVDHEETARLVQSFQAEYFMTSETCPSGTDRL IELMDSGLLEGDIWVNWQGDEPFINREMIDDLLQSVSEDSSDVWTLKKKLTADAEIQSPHVVKVVTDLKGQALYFSRSPI PYARIEGPTYYKHIGLYAYKTESLKRIQKMVPTPLEKAESLEQLRFMEGGLKIKIHETVHDTQGIDVPEDLLLALRLITQ FK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 6e-33 | 41 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 4e-33 | 41 |
