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Name : gabD-A (SNE_A02530) Accession : YP_004670621.1 Strain : Simkania negevensis Z Genome accession: NC_015713 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.- Position : 264703 - 266100 bp Length : 1398 bp Strand : - Note : - DNA sequence : ATGAAAATTTTTGGACCGTTAGTTGAAGGACAATATGCTAAATCTGGCACTGCCATTTCTCGCCTTTCTCTTGTCACGCA AAAAGAAATTGGAAAACTTCATCTTGCCGATGAGGCTGTTATTGAAAAAGCCCTTGCTTCTTTGCAAAACCCTTCCATAG AACAGCTGAGCCCCTATACACGATCTGAAATCTTGCAAAAGATTGCAACGCTTCTCACAAAACATCGAAACCCTCTTGCC GAAATGATCACCCATGAAATGGGAAAACCGCTCACTCAAGCGCGCACAGAAGTCGATTACACAGCCAGTTACTTTGTTTG GTTTGCAGAAGAAGCTAAACGAATCTACGGTATGGACATTCCTTCTCAATATCCCAACAAGCGAATTCAGCTTCGTTATG AACCGATTGGTCCATGCGCCATCATCTCTCCTTGGAATTTTCCCATAGCAATGGCTGGAAGAAAAATGGCCGCAGCCTTC GCTGCTGGCTGCCCCGTCATTGTGAAACCGAGTAGCGACACTCCTTTGTCTTTTCTTCTTTTTGGAAACTTATGTTTAGA AGCTGGGATTCCAAAAGAAGCCCTCCAAATCCTTGTCGGGAATGGAACAATGATTGGAAATGCCCTTATGAACACTTCGC TGATTCGTAAGCTCTCTTTTACCGGAAGCTGCGAAGTCGGAAAACATCTTTATCAAGGAAGTTCAACAAGTTTGAAAAAA CTCACCATGGAATTGGGAGGACATGCTCCCCTTCTCGTCTTTGACGATGCTAATTTAGAAAAAGCAGTCGATGGAGCCAT TGCGTCTAAATTCCGCCAAAGTGGGCAAACATGCGTTTGTACCAACCGCTTCTTTATTCAATCAAAAATCTATCCTCACT TTTTGAAACGGTTTATTGAAAAAGTTAAAAACCTCTCCGTTGGAAATCCTTTCGATGAAACAACCGATTTAAGCTCTGCT CTTCACCCCACTTCTGTCGAAAAAACAAAACGACACATTGCAGATGCCATGAAGCGAGGTGCAAAAGCCCATTTACAAGC AAAAGAGGCGCATGAGCCCGAAATCTTAACCGATGTAACAGATGAAATGCTCATCTTTAACGAAGAAACCTTTGGTCCTG TTGCAGGAATTGCTAATTTTAAAACGGCGAATGAAGTGCTGAGGCGCGCAAATCAAACGCCTTATGGACTCGCAGCCTAT GTTTTCACCGAAGGACTTGCACAAGCAGAAAAAGTTTGCGCCGGATTAGAGTTTGGTGTCATTGGATTAAACGATGGAGC TTTTTCTGCAGCAGAGCTCTCTTTTGGTGGCATCAAAGCTTCAGGTTTTGGGCGGGAAGGTGGGCCACACGGCATTTATG AGTACCTAAAGGAAAAAATTATTTCAATACTCATGTGA Protein sequence : MKIFGPLVEGQYAKSGTAISRLSLVTQKEIGKLHLADEAVIEKALASLQNPSIEQLSPYTRSEILQKIATLLTKHRNPLA EMITHEMGKPLTQARTEVDYTASYFVWFAEEAKRIYGMDIPSQYPNKRIQLRYEPIGPCAIISPWNFPIAMAGRKMAAAF AAGCPVIVKPSSDTPLSFLLFGNLCLEAGIPKEALQILVGNGTMIGNALMNTSLIRKLSFTGSCEVGKHLYQGSSTSLKK LTMELGGHAPLLVFDDANLEKAVDGAIASKFRQSGQTCVCTNRFFIQSKIYPHFLKRFIEKVKNLSVGNPFDETTDLSSA LHPTSVEKTKRHIADAMKRGAKAHLQAKEAHEPEILTDVTDEMLIFNEETFGPVAGIANFKTANEVLRRANQTPYGLAAY VFTEGLAQAEKVCAGLEFGVIGLNDGAFSAAELSFGGIKASGFGREGGPHGIYEYLKEKIISILM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-81 | 45 |
