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Name : gabD-B (SNE_A19100) Accession : YP_004672278.1 Strain : Simkania negevensis Z Genome accession: NC_015713 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.- Position : 1989505 - 1990968 bp Length : 1464 bp Strand : + Note : - DNA sequence : ATGCTTAAACTCAAAGATCCTTCACTTCTTCGCACAGACAGCTACATCAATGGCAAGTGGATCAGGGGAAAAAGTTCATT TACTGTTAAAAATCCCTACGACGACAAAACTGTGGCTGAAGTGACTGAAGTTGGGCAGGCTGAAACCAAAAAAGCCATCG ATTCGGCTCAAAAAGCCTTTGAAGAGTGGAAAAAACTCACTCCTAAACAACGAGGGGACTACCTGAAAAAATGGGAAGAA CTCATCTATGAAAACTGGGATGATATCTGCACTATCTTGACCTATGAAGCAGGGAAACCCTTTGAACAATCAACTCACGA ACTCATGGGGTGTACCGGATTTCTGAACTGGTATGCGCAAGAAGCCCATCGCCTCCATGGCTATACTTTGCAATCACCTG ATCCGAACCGACGGTTCATGATTTTGCGCCAACCCATTGGAGTTGTCGGAATCATTTCCCCATGGAATTTCCCCTCTGTT CTCGTCATCCAAAAATGCGCCCCCGCTTTGGCTGCTGGTTGCACCGTTGTCCTCAAGCCCGCTGAAGACACCCCTCTCTC TGCGCTTGTCCATGCAGAACTCGCCCATCGAGCTGGCATTCCCCATGGAGTTTTCAATGTTCTCACCTGTAAAGACCCGA CCGAAGTCGGCAATGAAATGACCTCAAATCCCCTTGTTCGCAAGCTTACCTTCACCGGTTCAACCGAAGTCGGAAAAAAA CTTGCAGCTGCAGCTGGTAACACCATCAAAAACCTTTGCATGGAGCTGGGTGGCAACTGCCCTGCGATCATTTTTGAGGA CGCCGATTTAGAAAAAGCGGTCCTCTCTACTTTTTGGTTCAAGTTTTACAATGCTGGTCAATGTTGCAATAACATCAATC GGATTTTCATACATGAGCGTCTTTACGATCAGTATGTCAAACAATTTCAAAAGATGATCGACAACTTTCTCAAACTTGGC TCAGGGATGGATAAAACGACTAACATTGGGCCTCTCATCAATGAGCAAGGAATTGCCAAAGTCGAAGAGCTTGTCGATGA CGCCCTCAGTCAAGGGGCAACAGCTCTCCGTGGTGGCTGCCGAGCATCTAATGGACCCCTCTTTTACGAGCCCACACTTC TAATCGATGTCGATCCCAAAATGCGTATGTACCGTGAAGAGGTCTTTGGGCCTGTCGCAAGTTGCTACCAATTCAATGAC GAAGACGAAGTGATTCGTATGGCAAACGACACCCACTACGGACTTGCAGCCTATCTTTATACAGAAAACATTGGGCGGAG CTGGCGTGTAGCCGAAGCCCTCGAAGCTGGATCTATTGGTGTAAACACCCATGATGTTGTTTCAGAACTTTTACCTTTTG GCGGCTGGAAGCAATCGGGAATTGGGCGAGAAAACTCTGCAGTGGAAAGCCTCAACGCTTACTGCGAAACAAAATCACTT GTCATTGCTGGCATTCAGCATTAG Protein sequence : MLKLKDPSLLRTDSYINGKWIRGKSSFTVKNPYDDKTVAEVTEVGQAETKKAIDSAQKAFEEWKKLTPKQRGDYLKKWEE LIYENWDDICTILTYEAGKPFEQSTHELMGCTGFLNWYAQEAHRLHGYTLQSPDPNRRFMILRQPIGVVGIISPWNFPSV LVIQKCAPALAAGCTVVLKPAEDTPLSALVHAELAHRAGIPHGVFNVLTCKDPTEVGNEMTSNPLVRKLTFTGSTEVGKK LAAAAGNTIKNLCMELGGNCPAIIFEDADLEKAVLSTFWFKFYNAGQCCNNINRIFIHERLYDQYVKQFQKMIDNFLKLG SGMDKTTNIGPLINEQGIAKVEELVDDALSQGATALRGGCRASNGPLFYEPTLLIDVDPKMRMYREEVFGPVASCYQFND EDEVIRMANDTHYGLAAYLYTENIGRSWRVAEALEAGSIGVNTHDVVSELLPFGGWKQSGIGRENSAVESLNAYCETKSL VIAGIQH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 6e-105 | 46 |
