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Name : clpB (SNE_A17760) Accession : YP_004672144.1 Strain : Simkania negevensis Z Genome accession: NC_015713 Putative virulence/resistance : Virulence Product : chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1850965 - 1853598 bp Length : 2634 bp Strand : + Note : - DNA sequence : ATGGCACCACAGTTCACAGAATCTGTTGCTCAAGTTTTAAACCAAGCAGTCAGTGATGCAGAAAAAAGGCGGCACACGGA GGTCACGGAGCACCATGTCCTCTATGCGTTTTTTCAAGATCGGGCAGGCTACTTTCAAACACTGACAACAGCCCTAGGTC TCGACCCCCATCCCCTTCTCTTAGCTCTCGAAAATAAACTCGCATCGCTTCCTACATTTTCTGGGCAAGCAGACCAGGCA AGTTTAAGTCGTGGTTTGCAAAGCCAAATCAATCACGCCCATGTTCTTTCGCAAAAATGGAAAGACTCTTATATCAGTAG CGATCATTTCTTTTACATTTTTTGGGAAACGGCAAGTGATCCGTTTAAAAGCTGGCGTGAAGCTTCAAAATTGAGCCTGA AACAAGTTGAAAAGAAAATCCAAGAAATCCGCGGAGGTAGGCACATGGATTCTCCTAGTGGTGAAGCAAGTCTTCAAGCT TTGGAAAAGTTTTGCAAAAATCTGACCGATTTAGCAAAGCAAGGAAAACTCGATCCAGTGATTGGCCGAGATGAAGAGAT CCGTCGTACGATCCAAGTCTTAAGCCGCCGGACGAAAAATAATCCTCTCCTAATTGGAGAGCCTGGGGTGGGGAAAACGG CTATTGCAGAAGGGCTTGCCCATAGGATCATTCAAGAAGACATCCCCGATTCCCTAAAAGGAAAACAATTGCTTGTGCTT GATTTGGGAAGTTTGATTGCTGGAACCAAATTCCGGGGAGAGTTTGAAGAAAGACTCAAAGGAATTCTCAAAGAAATCGA GCAAAGTGAAGGACAAATCATCCTTTTTATCGATGAAGTTCACACATTAGTGGGGGCAGGAGCCTCGGAAGGAGCGATGG ATGCTGCCAATCTCTTGAAACCTGCACTTGCGCGAGGAACCCTTCACTGTATTGGGGCAACTACCCTGAATGAATACCAA AAGTACATTGAAAGAGATGCTGCTCTTGAACGCCGTTTTCAACCTGTCTTAGTCAAAGAGCCCTCCTTAGAGGATGCCAT TGCAATTTTACGTGGGCTCAAAGAACGGTATGAAAACTATCACGGCGTCCGCATCACAGAAGGGGCTTTGCACGCAGCCG TTTTTCTCTCCCATCGCTACATCAGTGACCGCCAACTTCCCGACAAGGCCATCGATTTGATCGATGAAGCAGCGAGTTTG ATTCGGATGCAAATTGGGAGTCGTCCTCTTCCTATTGACACCAAAGAGCGAGAACTCGGAACTTTGATTGTGAAGCAAGA AGCTCTCAAACGTGAAGACACTCCTGTAGCAAAAGGCGAAGCTAAAAAACTCGAAGAGCAAATTGCCAAAACTAAAGAAG AGCTCAGTATTTTGAGAGAGCAGTGGAATCAAGAAAAAAAACTCATCGAAGAACTCAAAGAGAAAAAAGGAGAACTTGAA AACCTCCGTTTCTTAGAAGAAGAAGCAGAACGGGCTTCTGACTACAACCGCGTCGCAGAAATTAGGTATAATGAAAAGCC TGCACTTGAAAAGGCAATCAAAGAAAAAGAAGAAACCTTAGAAAATAAACCCAACCGCCTCCTTCAAGAAGAAGTCGATG AAAAACTCATCGCCCAAATCGTTGCAAAGTGGACGGGAATCCCCGTGCATAAAATGCTCGAAGGAGAAGCTGACCGCCTT CTTTCTCTCGAATCAAGCTTAGAAAAACGGGTCGTGGGGCAACATTTTGCCGTCGAAGCAGTCAGCGAAGCGATTCGCCG CTCAAGAGCGGGACTCAGTGATCCGAACCGCCCACTTGGAGCCTTTCTTTTTGTGGGTCCCACAGGTGTTGGGAAAACAG AACTTGCCAAAACTCTGGCTGAAGAACTCTTCAACCAAGAAGAAGCAATCACCCGTTTAGACATGTCTGAGTACATGGAA AAACATTCCGTTTCGAAATTGATCGGTTCGCCTCCAGGCTATGTCGGCTACGACGAGGGAGGACAATTGACAGAAGCTCT CCGCCGCCGCCCTTATAGTGTTGTTCTCTTCGACGAAATTGAAAAAGCCCACCACGATGTATTCAACATCTTACTGCAGA TGTTTGATGACGGACGGATCACAGACAGCAAGGGACGAGTCGTAAACTGTCGCCATGCCCTCTTCATTATGACATCCAAT TTGGGTTCTGAACAATTGCTCGACTATATTAAGCAGAAAGGAAGTGACTTGTCGAAAGAGGCGATTCTCCAAATCGTCGA TCCTGTGATCAAAAACCACTTCCGACCAGAGTTCATCAACCGCTTAGACGAGATCCTCCCTTTTCTCCCTCTCCAAGAAA AAGACATGGAAAAAATTGTTTTAATCCAATTGGACCGCGTGAAAAAAAGATTAGACGAGCGCGATATCTCTCTCGACTAC TCACCTCAGGTGCTCGCCTATTTAGCAAAAGAAGGATATGACCCCTACTTTGGAGCACGGCCTCTCAAGCGGCTCATTCA GCAAACAGTTGTGAACGAGCTTTCTCAAGCTATTCTAAAAGGAGAGATAAAAAATGACGATAAAATTGAGCTAAGTTTTG ACGAAAAAAATAATAAAATCGTTTTTGAAGCCAAAAAAATAGAACAAACAGAAACTTTAATTAAGCCATCATAA Protein sequence : MAPQFTESVAQVLNQAVSDAEKRRHTEVTEHHVLYAFFQDRAGYFQTLTTALGLDPHPLLLALENKLASLPTFSGQADQA SLSRGLQSQINHAHVLSQKWKDSYISSDHFFYIFWETASDPFKSWREASKLSLKQVEKKIQEIRGGRHMDSPSGEASLQA LEKFCKNLTDLAKQGKLDPVIGRDEEIRRTIQVLSRRTKNNPLLIGEPGVGKTAIAEGLAHRIIQEDIPDSLKGKQLLVL DLGSLIAGTKFRGEFEERLKGILKEIEQSEGQIILFIDEVHTLVGAGASEGAMDAANLLKPALARGTLHCIGATTLNEYQ KYIERDAALERRFQPVLVKEPSLEDAIAILRGLKERYENYHGVRITEGALHAAVFLSHRYISDRQLPDKAIDLIDEAASL IRMQIGSRPLPIDTKERELGTLIVKQEALKREDTPVAKGEAKKLEEQIAKTKEELSILREQWNQEKKLIEELKEKKGELE NLRFLEEEAERASDYNRVAEIRYNEKPALEKAIKEKEETLENKPNRLLQEEVDEKLIAQIVAKWTGIPVHKMLEGEADRL LSLESSLEKRVVGQHFAVEAVSEAIRRSRAGLSDPNRPLGAFLFVGPTGVGKTELAKTLAEELFNQEEAITRLDMSEYME KHSVSKLIGSPPGYVGYDEGGQLTEALRRRPYSVVLFDEIEKAHHDVFNILLQMFDDGRITDSKGRVVNCRHALFIMTSN LGSEQLLDYIKQKGSDLSKEAILQIVDPVIKNHFRPEFINRLDEILPFLPLQEKDMEKIVLIQLDRVKKRLDERDISLDY SPQVLAYLAKEGYDPYFGARPLKRLIQQTVVNELSQAILKGEIKNDDKIELSFDEKNNKIVFEAKKIEQTETLIKPS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 7e-123 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_004672144.1 | chaperone protein ClpB | VFG2084 | Protein | 4e-111 | 42 |
