Gene Information

Name : tpx (SNE_A12230)
Accession : YP_004671591.1
Strain : Simkania negevensis Z
Genome accession: NC_015713
Putative virulence/resistance : Virulence
Product : putative thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.-
Position : 1271058 - 1271585 bp
Length : 528 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAAAAATCCATATGCTCAAGATATGACAGTGATTACATTAAAAGGTTCCCCTATTCACACCAATGGAAGGCTTCC
CGCTGTTGGAAGTCAAGCCCCTGATTTTCTTTTGATTTCAACAGATCTAAAACCAATGTCTTTGAAGGACTACGCCAGGA
AAAAGCTCATTCTTGCAATTGTCCCCAGTTTAGATACCGGTGTATGCCTAACATCAGCAAAACAGTTTGAAGCAAGACTA
CAAAACCGAAGCGATATCCAAGTTTTATTCATTTCTGCAGACCTTCCATTTGCTCAAAAACGGGTTTGTGGATTTGAAAA
TCTCAAAAAAATTGAAACTTTATCGATGATGCGCGATCGGAAATTTGCAGAAGATTATGGTGTGCTTCTTATCGATGGTC
CCCTCCAAGGAATTGCAGCGCGCGCTGTTCTTGCCTTAGACGAAAACCATCAGATCCTTTACACCGAACTTGTTCCTGAA
ATAGCTCAAGAGCCCAACTACGATAAAGCGCTTACTTTTTTCGTTTAA

Protein sequence : 
MKKNPYAQDMTVITLKGSPIHTNGRLPAVGSQAPDFLLISTDLKPMSLKDYARKKLILAIVPSLDTGVCLTSAKQFEARL
QNRSDIQVLFISADLPFAQKRVCGFENLKKIETLSMMRDRKFAEDYGVLLIDGPLQGIAARAVLALDENHQILYTELVPE
IAQEPNYDKALTFFV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-26 41
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-26 41
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 7e-27 41
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 7e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_004671591.1 putative thiol peroxidase VFG0087 Protein 3e-27 41