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Name : epsE (SNE_A01000) Accession : YP_004670469.1 Strain : Simkania negevensis Z Genome accession: NC_015713 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 116833 - 118413 bp Length : 1581 bp Strand : + Note : - DNA sequence : ATGATAGACCAAGAAAAAGAAGACTTTCTCTTAGCAAAACGATTTGGACTTGAACCTGTTTATGATCTGTCAAATTATCC TTTCATCAAAGAGAAAGTCCGCCGCTTACCTTACAGTTTTGTGAAGCAAAGACTCGCCCTTCCCTTAAAAGAACATGAGG GAAAGCTTCTCGTCGCTATCTCCCACCCTTACGACTTAGAAGTGCTCGAAGAGATCCGTTGCATGACTGGAATGGATGTC CAAGAAGTTTTTTGTCCCGAGCCTCAGCTTAAACAGGCGATTGAAAAGTGTTACCACCAAGGTGAAAAAGAAGCTTCGCT TTACATTGAAGGGCTCAAGAAAGAAGGGAATGGTCATAAAGAAGAAATAGGAGAAGAAGAGTACGACCTTCTCAGTGCTC AAGACAATTCTCCCGTTGTCCGGTTGCTCAATATGATCATTGCAGAAGCCATCCAACAAGGGGCCTCAGATATCCACTTT GAACCTCTTGAAAACGAAATGGATATTCGCTATCGGATCGACGGGGTTCTTCAATTTCGCCATTCGCCACCACCCGAAAT GCAAAAGCAACTTGTCACACGTGTCAAGGTCATGGCCAAACTCGACATTGCCGAACACCGCTTGCCTCAAGACGGTCGGA TCAAACTCAATATGGGGGGGCGGCAAATTGATTTTCGTGTCAGCACCGTTCCTGTCGTTTATGGCGAACGGATTGTGATG CGTATTTTAGACAATAGCAACATTGTCCTCGGACTCGATAAAATCGGCATGGCCGAATTGACGCTGACCAATTTACGCAA ATACCTTCATCAGAACCAAGGGATCATCCTCGTCACCGGACCCACAGGAAGTGGGAAGACCACAACGCTTTATAGCGCCA TTTCAGAGATTCATTCAGAAGAAGTGAATGTGATGACAATCGAAGATCCGGTTGAATACAAACTTGCAGGGATTGCCCAA ATCGGAGTGAATCCCAAGATTAAACTCTCATTTGCAACAGGGTTGCGACACATTCTCAGACAAGATCCTGATATCATCAT GATTGGGGAGATTCGTGATAAAGAAACTGCCGAAATTGCCATTCAATCCTCTCTTACAGGCCACCTTGTTCTCAGCACTC TCCACACAAACGACGCCCCTTCCGCCCTGACCCGGCTCGTCGATATGGGCATCGAATCTTACCTCCTTTCTTCATCCATT TTAGCAATTCTTGCCCAACGCCTTGTTCGCCGCATTTGCGAAGACTGCAAAGTGGGGTATAAGCCCTCAGACACCGAACT TTCCGAGCTTGGACTCAAACGAAAATCCTTAGAATCAGACATGCTTTACAAAGGAGAAGGATGTGGCAGCTGCTTTGGAT CAGGCTATCGTGGTCGCTCGGGGATTTACGAGCTCATGCCTGTCAATCACGGCATCAAAATGCAACTGCTTCGCTCTGCT GATGCAACGCAGCTCCAAAAAGCTGCTGTCGAATCGGGAATGAAAACATTGCGCGAAGAAGGAGCGGTTTTGGCAAATCA AGGAGTGACCACCACCTCAGAAGTCCTCCGCGTCACCCGTCAAATTGAACTTTACTCATAG Protein sequence : MIDQEKEDFLLAKRFGLEPVYDLSNYPFIKEKVRRLPYSFVKQRLALPLKEHEGKLLVAISHPYDLEVLEEIRCMTGMDV QEVFCPEPQLKQAIEKCYHQGEKEASLYIEGLKKEGNGHKEEIGEEEYDLLSAQDNSPVVRLLNMIIAEAIQQGASDIHF EPLENEMDIRYRIDGVLQFRHSPPPEMQKQLVTRVKVMAKLDIAEHRLPQDGRIKLNMGGRQIDFRVSTVPVVYGERIVM RILDNSNIVLGLDKIGMAELTLTNLRKYLHQNQGIILVTGPTGSGKTTTLYSAISEIHSEEVNVMTIEDPVEYKLAGIAQ IGVNPKIKLSFATGLRHILRQDPDIIMIGEIRDKETAEIAIQSSLTGHLVLSTLHTNDAPSALTRLVDMGIESYLLSSSI LAILAQRLVRRICEDCKVGYKPSDTELSELGLKRKSLESDMLYKGEGCGSCFGSGYRGRSGIYELMPVNHGIKMQLLRSA DATQLQKAAVESGMKTLREEGAVLANQGVTTTSEVLRVTRQIELYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-91 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-92 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| epsE | YP_004670469.1 | general secretion pathway protein E | VFG0182 | Protein | 1e-91 | 48 |
| epsE | YP_004670469.1 | general secretion pathway protein E | VFG1876 | Protein | 2e-85 | 45 |
| epsE | YP_004670469.1 | general secretion pathway protein E | VFG2048 | Protein | 2e-92 | 44 |
| epsE | YP_004670469.1 | general secretion pathway protein E | VFG2426 | Protein | 2e-72 | 43 |
| epsE | YP_004670469.1 | general secretion pathway protein E | VFG1880 | Protein | 3e-88 | 43 |
