Gene Information

Name : LILAB_35710 (LILAB_35710)
Accession : YP_004670101.1
Strain : Myxococcus fulvus HW-1
Genome accession: NC_015711
Putative virulence/resistance : Virulence
Product : putative type III secretion system protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 8781389 - 8781658 bp
Length : 270 bp
Strand : -
Note : COG1987 Flagellar biosynthesis pathway, component FliQ

DNA sequence :
ATGACCCAGGATGTCTTTCTCACCCTGGGGCGCGAGGCCTTGCTGCTGATGGTGATGGCGTCGCTGCCGCCGATTGGCGC
GAGCCTGGTGGTGGGGTTCTTGTCGAGCCTGTTCCAGGCCACCACGCAGCTTCAGGAGTCCACGCTTTCGGTGGTGCCCA
AGCTGTGCGCCGCCGTCCTGGCGTTGGTCCTGGCGGGCCCCTGGATTGCCGGGCAGCTCACGCGCTTCACGCACCAGCTC
CTGCTGCTCATCTCCGAGGTCGCGGCATGA

Protein sequence :
MTQDVFLTLGREALLLMVMASLPPIGASLVVGFLSSLFQATTQLQESTLSVVPKLCAAVLALVLAGPWIAGQLTRFTHQL
LLLISEVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcS AAT96263.1 HrcS Virulence S-PAI Protein 2e-04 45
hrcS AAT96304.1 HrcS Virulence S-PAI Protein 2e-04 45
hrcS AAT96344.1 HrcS Virulence S-PAI Protein 2e-04 45
hrcS AAB06006.1 HrcS Virulence Hrp PAI Protein 7e-05 44
hrcS ABA47280.1 HrcS Virulence S-PAI Protein 4e-04 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LILAB_35710 YP_004670101.1 putative type III secretion system protein VFG0043 Protein 0.003 49
LILAB_35710 YP_004670101.1 putative type III secretion system protein VFG1260 Protein 1e-05 44