Gene Information

Name : LILAB_25010 (LILAB_25010)
Accession : YP_004667973.1
Strain : Myxococcus fulvus HW-1
Genome accession: NC_015711
Putative virulence/resistance : Virulence
Product : DNA-binding heavy metal response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5927003 - 5927683 bp
Length : 681 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
GTGAGGCTGTTGCTGGTGGAGGACGAGGAGCGGATGGCGAAGCTTCTCCGGCGAGGGCTCGGAGAAGAGGGCCACCTCGT
GGACACCTGCCGCACGGCGGAGGACGCGCTGGAGCAGGCGGGGGAGGTGGCCTACGACGCCATCATCCTCGACTGGGCGC
TGCCCGGCATGGACGGCGTGGCCCTGCTGCGCCGCTGGCGCGAGCGCGGCTTGATGACGCCGGTGCTGATGCTCACCGCG
CGCGGCACGGTGGGGGAGCGGGTGACGGGACTGCGCGCGGGCGCGGACGACTACCTGGTGAAGCCCTTCGCCTTCGAGGA
GCTGCTCGCGCGGCTGGAGGCGCTCCACCGCCGCTCGGAGGGCCATGCGCAGTCCTGGAGCGTGGGGCCCATCCACATCG
ACACCCGGCGGCGCACGCTGACGTGTGGTGAGCGGGAGGTGACGCTGACCGGCCGTGAGTTCGCGCTGCTGGGGGAGTTC
GCCTCGCGCGCGGGGGAGGTCCACACCCGCTCCAGCCTGCTGGCGAAGGTGTGGGGCCCCAGCTTCGACGGGCCGCCCAA
CATCGTGGACGTCTACGTGGGCTACGTGCGCGCGAAGCTGTCGGACGTGGGCGCGGAGGGCGTGTCCATCCAGGCGGTGC
GTGGCGTGGGCTTCCGCCTGGTGGTCGAGGGCTCGCGATGA

Protein sequence : 
MRLLLVEDEERMAKLLRRGLGEEGHLVDTCRTAEDALEQAGEVAYDAIILDWALPGMDGVALLRRWRERGLMTPVLMLTA
RGTVGERVTGLRAGADDYLVKPFAFEELLARLEALHRRSEGHAQSWSVGPIHIDTRRRTLTCGEREVTLTGREFALLGEF
ASRAGEVHTRSSLLAKVWGPSFDGPPNIVDVYVGYVRAKLSDVGAEGVSIQAVRGVGFRLVVEGSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-21 42
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 7e-11 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LILAB_25010 YP_004667973.1 DNA-binding heavy metal response regulator BAC0125 Protein 6e-23 43
LILAB_25010 YP_004667973.1 DNA-binding heavy metal response regulator BAC0083 Protein 6e-23 43
LILAB_25010 YP_004667973.1 DNA-binding heavy metal response regulator BAC0197 Protein 2e-20 43
LILAB_25010 YP_004667973.1 DNA-binding heavy metal response regulator BAC0111 Protein 7e-21 42
LILAB_25010 YP_004667973.1 DNA-binding heavy metal response regulator NC_002516.2.879194.p Protein 4e-19 42
LILAB_25010 YP_004667973.1 DNA-binding heavy metal response regulator BAC0308 Protein 2e-21 41
LILAB_25010 YP_004667973.1 DNA-binding heavy metal response regulator HE999704.1.gene1528. Protein 3e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LILAB_25010 YP_004667973.1 DNA-binding heavy metal response regulator VFG0596 Protein 3e-21 42
LILAB_25010 YP_004667973.1 DNA-binding heavy metal response regulator VFG1389 Protein 5e-25 42