|
Name : LILAB_19925 (LILAB_19925) Accession : YP_004666965.1 Strain : Myxococcus fulvus HW-1 Genome accession: NC_015711 Putative virulence/resistance : Virulence Product : type III secretion system protein Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 4707200 - 4708024 bp Length : 825 bp Strand : + Note : COG1338 Flagellar biosynthesis pathway, component FliP DNA sequence : GTGAACCTCCCTGCCTCCGCCCGTCCCCGTCTCCCGCGCGTCCCGCCCTGGCTGTTCGCGGCCGTGGTCGCCGCTCATCC CCTCGCCGCGCTCGCGCAGAGGCGGGGGAGCGCCGCCATCCCCGACTCGGTGGTCAACGAGGCCGTCAACAGCGACTCGT TCGCCTCGCGCCCGCTCATCCTCATCCTGGCGCTGGCGGCCATGGGCCTGGTGCCCTTCGCGCTGATGATGGTGACCAGC TTCGTGAAGATTTCGGTGGTGCTCTCCATCGTCCGCTCGGCGCTGGGCACGCAGCAGATTCCGCCCACCCAGGTCATCAC CGGCCTGGCCGTCATCCTCACCGTCTACATCATGGCCCCGGTGGGGACGCAGATGTACCGCGCGGCCGGCCTGGACATCT GGGCCAAGGGGCCGGGCGTCTTCTCCTCGGAGACGGTGGGCTCCATGCTGGGCGCGGCCAACAAGTCCAAGGAGCCGCTG CGCGAGTGGCTCATGAAGAAGGTCACCACCAAGGACCGGGCGCTCTTCTTCAACCTCGCCAAGAAGCTGCGGCAGGGCGA GGACCGCGACGCCGTGGAGAGCGATGACTTCATGGTCATCATCCCGGCCTTCGTGGTGTCCGAGCTCAAGGAGGCCTTCC AGATAGGCTTCCTCCTGTTCGTGCCGTTCATCGTCATCGACATGGTGGTGGCCAACATCCTGCTGGCGCTCGGCATGCAC ATGCTGTCGCCCACCACCATCTCCATGCCGTTCAAGCTGCTGCTGTTCGTGCTCGTGGACGGCTGGTATCTCATCGCCAA GGGCCTGGTCGTCGGCTACCTGTAG Protein sequence : MNLPASARPRLPRVPPWLFAAVVAAHPLAALAQRRGSAAIPDSVVNEAVNSDSFASRPLILILALAAMGLVPFALMMVTS FVKISVVLSIVRSALGTQQIPPTQVITGLAVILTVYIMAPVGTQMYRAAGLDIWAKGPGVFSSETVGSMLGAANKSKEPL REWLMKKVTTKDRALFFNLAKKLRQGEDRDAVESDDFMVIIPAFVVSELKEAFQIGFLLFVPFIVIDMVVANILLALGMH MLSPTTISMPFKLLLFVLVDGWYLIAKGLVVGYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-41 | 45 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-41 | 45 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 4e-41 | 44 |
| hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 4e-41 | 44 |
| hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 5e-41 | 44 |
| hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 5e-41 | 44 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 3e-39 | 44 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 5e-41 | 43 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 6e-36 | 43 |
| hrcR | YP_198720.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-41 | 43 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 5e-32 | 42 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 6e-32 | 42 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 6e-32 | 42 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 2e-31 | 42 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 5e-32 | 42 |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 3e-31 | 42 |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 3e-31 | 42 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 7e-33 | 41 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 7e-33 | 41 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 7e-33 | 41 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 5e-34 | 41 |
| escR | AAC38369.1 | EscR | Virulence | LEE | Protein | 1e-31 | 41 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 5e-32 | 41 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 5e-32 | 41 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 5e-32 | 41 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 7e-32 | 41 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 5e-32 | 41 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 7e-32 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LILAB_19925 | YP_004666965.1 | type III secretion system protein | VFG0394 | Protein | 2e-37 | 47 |
| LILAB_19925 | YP_004666965.1 | type III secretion system protein | VFG0044 | Protein | 3e-43 | 47 |
| LILAB_19925 | YP_004666965.1 | type III secretion system protein | VFG2338 | Protein | 7e-37 | 46 |
| LILAB_19925 | YP_004666965.1 | type III secretion system protein | VFG0188 | Protein | 9e-41 | 44 |
| LILAB_19925 | YP_004666965.1 | type III secretion system protein | VFG0827 | Protein | 3e-32 | 42 |
| LILAB_19925 | YP_004666965.1 | type III secretion system protein | VFG2494 | Protein | 3e-35 | 42 |
| LILAB_19925 | YP_004666965.1 | type III secretion system protein | VFG1259 | Protein | 8e-35 | 42 |
| LILAB_19925 | YP_004666965.1 | type III secretion system protein | VFG0715 | Protein | 8e-32 | 41 |
| LILAB_19925 | YP_004666965.1 | type III secretion system protein | VFG2016 | Protein | 6e-32 | 41 |
