Gene Information

Name : LILAB_12640 (LILAB_12640)
Accession : YP_004665513.1
Strain : Myxococcus fulvus HW-1
Genome accession: NC_015711
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2989612 - 2990346 bp
Length : 735 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
ATGTCCCCGCCCGACTCCCCGCCCCTGGTCGAACTGCGCGACGTCACGAAGGCCTACGCCGAAGGCGACACCACGCGCGA
GGTGCTCTCCGGCGTGCGGCTCTCCCTGCGCCGGGGCGAGTTCGTGGTGCTGCTGGGGCGCAGCGGCTCGGGCAAGTCCA
CGCTGCTCAACCTCATCAGCGGCATCGACCTGGCCAGCCAGGGCGAGGTCCGCGTGGACGGCCGCGACCTGGGACGGCTC
AACGAGCGCGAGCGCACGCTGCTGCGGCGCGAGCGCATCGGTTTCATCTTCCAGGCCTTCAACCTGCTCCCCACGCTGAC
GGTGGAGGAGAACGTGCGGCTGCCGCTGGAGCTCAACGGCCACGGCGGGCAGGAGGCCAGCGCCCGCGCGCGGGCGCTGC
TGGAGCAGGTGGGCCTGGGCGCCCGGGCCCGCAGCTTCCCGGACCGGCTGTCCGGCGGCGAGCAGCAGCGCGTGGCGGTG
GCCCGCGCGCTGGCCCATGAGCCGCCGCTGCTGCTGGCGGACGAGCCCACCGGCAACCTCGACGAGGGCACGGGGCGGCA
GGTGCTGGATTTGCTGGAGGCGCTGACGCGCAAGGGCAACACCTGCGCGCTCGTCGTCACCCACGAGCCCGGCCTGGTGG
CCCGCGCCCACCGCGTCCTGAAGATGGAGGACGGCCGGCTGGTGGAGGTGGCGCACACGCCCGCCCACGCCGTGGCCCTG
AAGGAGGCGCTGTGA

Protein sequence :
MSPPDSPPLVELRDVTKAYAEGDTTREVLSGVRLSLRRGEFVVLLGRSGSGKSTLLNLISGIDLASQGEVRVDGRDLGRL
NERERTLLRRERIGFIFQAFNLLPTLTVEENVRLPLELNGHGGQEASARARALLEQVGLGARARSFPDRLSGGEQQRVAV
ARALAHEPPLLLADEPTGNLDEGTGRQVLDLLEALTRKGNTCALVVTHEPGLVARAHRVLKMEDGRLVEVAHTPAHAVAL
KEAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LILAB_12640 YP_004665513.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-36 50
LILAB_12640 YP_004665513.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-36 42
LILAB_12640 YP_004665513.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 5e-38 41