Gene Information

Name : LILAB_10670 (LILAB_10670)
Accession : YP_004665123.1
Strain : Myxococcus fulvus HW-1
Genome accession: NC_015711
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2536928 - 2537680 bp
Length : 753 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGACGAACGAGACGAAGGCAGAGGCTTCCCCCGAGGGCGCTGGGGCGCGGGAGGGCGCGGAGCCCGGCAAGGCGCTCAT
CCACCTGGACGGGCTGACCAAGGTCTTCGAGACCGAGGAGGTGGAGACGCACGCGCTCTCCAACATCCACCTCAACGTGC
GCAAGGGGGAGTGGGTGGCGATTGTCGGCCCGTCGGGCTCCGGCAAGTCCACCCTGCTGGCGGTGCTGGGCCTGTTGGAC
ACGGCGACGCGCGGGGCCTACCTGCTGGACGGGCGCAGCGTGCTGGACTTGTCCGCGGCGGACCGGGCGCTGGTGCGCAA
CCGGCACATCGGCTTCATCTTCCAGAGCTTCAACCTCATCGGCGACCTGACGGTGTTCGAGAACGTGGAGCTGCCGCTGA
CGTACCGGGGCATGCCCGCCGCCGAGCGCAAGCAGCGGGTGGAGCGCGCGCTGGAGAAGGTGGGCATGGCGCACCGCGCG
CGGCACATGCCGGGGCAGCTCTCCGGTGGTCAGCAGCAGCGCGTGGCGGTGGCGCGCGCGGTGGCGGGCGACCCGCTCAT
CCTCCTGGCGGACGAGCCCACCGGTAACCTCGATTCGAAGAACGGCGAGGCGGTGATGCAGCTCCTCACCGAGCTCCACA
AGGGCGGCGCCACCATCTGCATGGTGACGCACGACCCGGCGCACGCGCGCGTGGCCACGCGCACGGTGAGCCTCTTCGAC
GGCCGCGTCGTCCAGGACGAGCAGCGCCGCTGA

Protein sequence : 
MTNETKAEASPEGAGAREGAEPGKALIHLDGLTKVFETEEVETHALSNIHLNVRKGEWVAIVGPSGSGKSTLLAVLGLLD
TATRGAYLLDGRSVLDLSAADRALVRNRHIGFIFQSFNLIGDLTVFENVELPLTYRGMPAAERKQRVERALEKVGMAHRA
RHMPGQLSGGQQQRVAVARAVAGDPLILLADEPTGNLDSKNGEAVMQLLTELHKGGATICMVTHDPAHARVATRTVSLFD
GRVVQDEQRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-22 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-22 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-22 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-21 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LILAB_10670 YP_004665123.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-38 52
LILAB_10670 YP_004665123.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-45 49
LILAB_10670 YP_004665123.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 9e-31 44
LILAB_10670 YP_004665123.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-25 42
LILAB_10670 YP_004665123.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 6e-24 41
LILAB_10670 YP_004665123.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LILAB_10670 YP_004665123.1 ABC transporter ATP-binding protein VFG2059 Protein 3e-09 42