Gene Information

Name : Zymop_0915 (Zymop_0915)
Accession : YP_004662104.1
Strain : Zymomonas mobilis ATCC 29192
Genome accession: NC_015709
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1050033 - 1050710 bp
Length : 678 bp
Strand : -
Note : KEGG: pla:Plav_0928 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver

DNA sequence :
ATGCGCGTTTTAGTCGTTGAAGATGAGCCGACGCTTTGTCGCCAGTTACGGACTACGTTGGAAGGCGCTGGTTATGCTGT
CGATCTTGCTACAGATGGCGAAGATGGTCATTTTCTAGGCTCAAGCGAAAATTATGATGCGGTAGTGCTTGATCTTGGCT
TGCCAGAAGTGGATGGCTTAACGGTTTTGGATCGTTGGCGGAAAGAGGGACGGGAAATGCCTGTTTTGGTTTTGACCGCC
CGTGACAGTTGGTCTGATAAGGTCGCTGGGCTTGATGCGGGTGCCGATGATTATTTAACGAAACCCTTTCAGACTGAAGA
GTTAATCGCACGCTTGAGGGCTCTGATCCGTCGCGCCTCTGGCAATGCATCTTCTGAATTAACGGCTGGTGATGTGCGGT
TGGATACCCGATCGGGCAAGGTTACTTTGGCGGGTGAACCGGTAAAGCTGACAGCACAGGAATATAAGTTATTATCTTAT
TTAATGCACCATAAAGGAAAAGTGGTCAGCCGCACCGAAATGATCGAGCATATTTACGATCAGGATTTTGATCGGGATTC
TAATACTATTGAAGTTTTTGTAACCCGTATTCGTAAAAAATTAGGTCAGGATGTTATTACTACTATCCGTGGACTTGGTT
ATGCTCTGAATGATCCCGAGGAACGGAATAATAGCTAA

Protein sequence :
MRVLVVEDEPTLCRQLRTTLEGAGYAVDLATDGEDGHFLGSSENYDAVVLDLGLPEVDGLTVLDRWRKEGREMPVLVLTA
RDSWSDKVAGLDAGADDYLTKPFQTEELIARLRALIRRASGNASSELTAGDVRLDTRSGKVTLAGEPVKLTAQEYKLLSY
LMHHKGKVVSRTEMIEHIYDQDFDRDSNTIEVFVTRIRKKLGQDVITTIRGLGYALNDPEERNNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 9e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Zymop_0915 YP_004662104.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 3e-37 46
Zymop_0915 YP_004662104.1 winged helix family two component transcriptional regulator BAC0487 Protein 2e-32 45
Zymop_0915 YP_004662104.1 winged helix family two component transcriptional regulator NC_002695.1.913289.p Protein 3e-37 45
Zymop_0915 YP_004662104.1 winged helix family two component transcriptional regulator CP000034.1.gene2022. Protein 1e-37 45
Zymop_0915 YP_004662104.1 winged helix family two component transcriptional regulator CP000647.1.gene1136. Protein 2e-38 45
Zymop_0915 YP_004662104.1 winged helix family two component transcriptional regulator CP001918.1.gene2526. Protein 5e-37 45
Zymop_0915 YP_004662104.1 winged helix family two component transcriptional regulator BAC0530 Protein 2e-38 45
Zymop_0915 YP_004662104.1 winged helix family two component transcriptional regulator CP004022.1.gene1005. Protein 3e-38 44
Zymop_0915 YP_004662104.1 winged helix family two component transcriptional regulator CP001138.1.gene1939. Protein 8e-38 44
Zymop_0915 YP_004662104.1 winged helix family two component transcriptional regulator BAC0083 Protein 1e-28 42
Zymop_0915 YP_004662104.1 winged helix family two component transcriptional regulator BAC0308 Protein 3e-28 42
Zymop_0915 YP_004662104.1 winged helix family two component transcriptional regulator BAC0197 Protein 4e-31 42
Zymop_0915 YP_004662104.1 winged helix family two component transcriptional regulator BAC0125 Protein 6e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Zymop_0915 YP_004662104.1 winged helix family two component transcriptional regulator VFG0473 Protein 4e-31 45
Zymop_0915 YP_004662104.1 winged helix family two component transcriptional regulator VFG0475 Protein 8e-38 44
Zymop_0915 YP_004662104.1 winged helix family two component transcriptional regulator VFG1390 Protein 6e-29 42