Gene Information

Name : Zymop_0358 (Zymop_0358)
Accession : YP_004661551.1
Strain : Zymomonas mobilis ATCC 29192
Genome accession: NC_015709
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 407971 - 408627 bp
Length : 657 bp
Strand : +
Note : KEGG: pmu:PM0781 HexA; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGATTAGATTTAATAATGTTACAAAAATTTATAAAAATAAAAACTTTGAAAATATTGTCTTCAAAGACCTTAACTTTAC
ATTAAGGCGAGGGCAAAGCCTGGGTATTTGTGGAGCGAATGGGGCGGGAAAGTCAACCCTTACACGTCTAATCGCCGGTG
TAGAAAAACCAACTTCGGGCACAATTACAAGAAAAATGTCTACATCTTGGCCTATCGGATATACTAGCGCGTTTCAAAGC
AGTCTGACAGGCGCTGATAATTGTCGCTTCATTGCGCGTGTTTATGGGAAACCCGAAGCTGAACTTTTGGCTTATGTAGA
AGATTTTGCTCAATTAGGACGTTTCTTCAGACAGCCTATTAAAACTTATTCAGCGGGCATGATTGCAAGGTTAGCTTTCG
GTGTATCCTTGGCAGTACATTTCGACTGTTATCTGGTCGATGAAGTTACAGGAGCTGGCGATGAGCGATTTAGAGCTCGA
TGCCAAGAAGCCTTAGCCCAACGTCGTCAAAAAGGTACCCTTGTTATGATTTCGCATGACTTCAATACGTTGAGAGAATA
TTGTGACTTAGGGGCTGTTATGTATCAAAAACAACTTTATTTATTTGATAATATTGATGAAGCAATTGAATTTCACCAAG
AAAAACAAAATCAATAA

Protein sequence : 
MIRFNNVTKIYKNKNFENIVFKDLNFTLRRGQSLGICGANGAGKSTLTRLIAGVEKPTSGTITRKMSTSWPIGYTSAFQS
SLTGADNCRFIARVYGKPEAELLAYVEDFAQLGRFFRQPIKTYSAGMIARLAFGVSLAVHFDCYLVDEVTGAGDERFRAR
CQEALAQRRQKGTLVMISHDFNTLREYCDLGAVMYQKQLYLFDNIDEAIEFHQEKQNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 9e-49 46
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 2e-46 46
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 1e-47 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Zymop_0358 YP_004661551.1 ABC transporter VFG2563 Protein 8e-51 47
Zymop_0358 YP_004661551.1 ABC transporter VFG0696 Protein 1e-47 46
Zymop_0358 YP_004661551.1 ABC transporter VFG1449 Protein 7e-47 46
Zymop_0358 YP_004661551.1 ABC transporter VFG0258 Protein 3e-48 45