Gene Information

Name : Zymop_1642 (Zymop_1642)
Accession : YP_004662821.1
Strain : Zymomonas mobilis ATCC 29192
Genome accession: NC_015709
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1917238 - 1919832 bp
Length : 2595 bp
Strand : -
Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; KEGG: pla:Plav_1751 ATPase; SMART: AAA ATPase

DNA sequence :
ATGAATTTTGAAAAGTTAACCGATCGGGCCAAGGGCTTTATTCAATCAGCGCAGACGGTAGCCATCCGCCTTAATCATCA
AAGAATTGCGCCTGAACATTTGCTCAAAGCTTTATTGGAAGATGAACAGGGTATGGCATCCGGCTTGATCCGGCGTGCTG
GGGGTGATCCTACCATTGCGGTTCGGGAAACGGATGCCGCACTTTCAAAAATTCCTTCCGTATCAGGTAGCGGGGCCAAT
ACCCCCCCCGGCTTGGATAACGATGCTATCCGTCTTTTAGATCAGGCCGAACAGGTGGCGACCAAGGCCGGTGATTCTTA
TGTCACGGTTGAAAGATTACTTTTGGCAATGACTTTGTTGCCGGAAACGACCGTTGGTAAAATCCTGAAGGATGCGGGTC
TTAAGGCTGAAGCTTTAAATACAGCCATCAATGAATTACGTTCTGGACGGACGGCAGATACAGCCAGTGCCGAAGATCGT
TACGATGCTTTGAAAAAATTCGCCCGTGACTTAACCGAAGCTGCCCGCGAAGGTAAGCTGGATCCTGTTATTGGACGGGA
TGAAGAGATTCGGCGTACCGTTCAAATTTTGGCACGTCGCACCAAAAACAATCCCGTTTTGATCGGTGAACCGGGCGTTG
GTAAGACGGCTATTGTTGAAGGGCTGGCCTTAAGAATAGTCAATGGCGACGTTCCAGAAGGCCTGCGCGATCGCGTTTTA
ATGGCGCTTGATATGGGCTCTTTGATCGCAGGTGCCAAATATCGGGGCGAATTTGAAGAGCGCTTAAAAGGCGTTTTAGA
TGAAGTAAAGCAGTCTGATGGTCAGATAATTCTCTTCATTGATGAAATGCATACCCTTATCGGGGCGGGCAAATCAGATG
GCGCCATGGATGCTGGCAATTTATTGAAACCGGCTTTGGCGCGGGGTGAATTGCATTGTATCGGCGCGACCACGCTTGAT
GAATATCGTAAATATGTTGAAAAGGATCCTGCTTTGCAGCGTCGTTTTCAGCCTGTGTATGTTGGCGAACCTACGGTTGC
CGATACGATATCGATTCTCCGCGGATTGAAAGAGAAATACGAAGCGCATCATGGTGTTCGGATTACTGATGCGGCCCTTG
TTTCGGCGGCGACGCTTTCCAATCGCTACATTACCAACCGATTTTTACCGGATAAAGCCATTGATTTGGTGGATGAGGCC
GCCAGCCGTCTGCGGATGGAGGTAGATTCCAAGCCAGAAGAAATCGAATCCCTCGATAGACGGATTATTCAGCTTAAAAT
CGAACGGGAAGCGCTTCGTAAAGAAGATGATGAGGCTTCACGCGATCGACTTAAAACCCTTGAACATGATTTGGGCGATC
TGGAGCAACAGTCATCGGAATTGACGGCGCGTTGGAAGAATGAACAGGACAAAATCAAGGCAGAAGCCCGGTTAAAAGAA
AAGCTGGATCATGCCCGTATTGCCCTCGAACAAGCTGAACGCTCTGGCGACCTGACAAAAGCAGGTGAGCTTAGCTATGG
CATTATTCCACAGCTGGAAAAGCAGCTTAGTGATGCGCAAAATGAAGCGCAGGGCGCTATGCTGCGGGAAGAAGTCACCA
GTCAGGATATTGCCTCGATCGTTTCGCGTTGGACAGGTATTCCCGTTGATAAAATGCTGGAAGGCGAACGCGAAAAACTT
GTCCATATGGAAGATATTCTGGGTAAAAGGGTTATTGGACAAGCAGAAGCGGTCAAGGCTGTTAGTCGGGCTGTCCGTCG
TTCACGCGCCGGTTTACAAGATCCGAACCGACCGATGGGCTCTTTCCTGTTCCTCGGTCCTACCGGTGTTGGTAAAACCG
AACTCACAAAAGCGCTGGCAAGCTTTCTGTTCGATGATGATCGCGCCATGGTGCGCATTGATATGTCAGAATTTATGGAA
AAGCATGCGGTTGCGCGTTTGATCGGGGCACCTCCGGGATATGTCGGCTATGAAGAAGGCGGGGTGTTAACCGAGGCTGT
CCGTCGTCGGCCTTATCAGGTCATCTTGTTTGATGAAGTCGAAAAAGCCCACCAGGATGTCTTCAATATCTTGCTTCAAG
TATTGGATGATGGCCGTTTGACCGATGGTCAAGGACGGACAGTTGACTTTTCCAACACGTTAATCGTCCTTACTTCAAAC
TTAGGGGCACAATATCTTGCCAATCTGAGCGATGATGAATCAGTGGAAAGTGTCGAGCCTAAAGTTATGGAAGTGGTTCG
GGCCCATTTTCGGCCAGAATTTCTAAACCGACTTGATGAAATCATTCTGTTTCATCGGCTGGGTCAAGAGCATATGGGGC
CGATTGTTGATATTCAGGTCAATCGCCTTTGCAAATTGCTGGCAGATCGTAAAATTACCCTTGAGTTATCGGATAAAGCA
CGCGCATGGTTAGGGCGTGTCGGATATGATCCTGTCTATGGCGCACGGCCGCTAAGGCGAGCAGTCCAAAGATATCTTCA
AGATCCTTTAGCAGAAGAATTACTAAAGGGTGAAATCCACGATGGACAGACAGTAAAAGTTGACGAAGGTGATAGCCATT
TAATCTTCAAGACTGAAGAATCAGTTCCGGCTTAA

Protein sequence :
MNFEKLTDRAKGFIQSAQTVAIRLNHQRIAPEHLLKALLEDEQGMASGLIRRAGGDPTIAVRETDAALSKIPSVSGSGAN
TPPGLDNDAIRLLDQAEQVATKAGDSYVTVERLLLAMTLLPETTVGKILKDAGLKAEALNTAINELRSGRTADTASAEDR
YDALKKFARDLTEAAREGKLDPVIGRDEEIRRTVQILARRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPEGLRDRVL
MALDMGSLIAGAKYRGEFEERLKGVLDEVKQSDGQIILFIDEMHTLIGAGKSDGAMDAGNLLKPALARGELHCIGATTLD
EYRKYVEKDPALQRRFQPVYVGEPTVADTISILRGLKEKYEAHHGVRITDAALVSAATLSNRYITNRFLPDKAIDLVDEA
ASRLRMEVDSKPEEIESLDRRIIQLKIEREALRKEDDEASRDRLKTLEHDLGDLEQQSSELTARWKNEQDKIKAEARLKE
KLDHARIALEQAERSGDLTKAGELSYGIIPQLEKQLSDAQNEAQGAMLREEVTSQDIASIVSRWTGIPVDKMLEGEREKL
VHMEDILGKRVIGQAEAVKAVSRAVRRSRAGLQDPNRPMGSFLFLGPTGVGKTELTKALASFLFDDDRAMVRIDMSEFME
KHAVARLIGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHQDVFNILLQVLDDGRLTDGQGRTVDFSNTLIVLTSN
LGAQYLANLSDDESVESVEPKVMEVVRAHFRPEFLNRLDEIILFHRLGQEHMGPIVDIQVNRLCKLLADRKITLELSDKA
RAWLGRVGYDPVYGARPLRRAVQRYLQDPLAEELLKGEIHDGQTVKVDEGDSHLIFKTEESVPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-108 43
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 3e-108 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-108 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Zymop_1642 YP_004662821.1 ATP-dependent chaperone ClpB VFG2076 Protein 2e-120 45