Gene Information

Name : Zymop_0996 (Zymop_0996)
Accession : YP_004662185.1
Strain : Zymomonas mobilis ATCC 29192
Genome accession: NC_015709
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1174268 - 1176091 bp
Length : 1824 bp
Strand : -
Note : KEGG: rlt:Rleg2_6395 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGGCTGATACTTCTGATCAGAATATTGATGATATTCCCAATCACGTAACAACTGGCCCAATCCGTGGCTCCCGTAAAAT
CTATGTAGAAGGTAAAAAGGGTGTCCGCGTGGCCATGCGCGAAATTGCCCTTGAACCTTCTGCTAAAGAGCAACCGGTTC
GGGTTTATGATTGTTCGGGCCCTTATACCGATCCCAATATAAAAATTGATATCCGTCAAGGTCTTAAACCGATACGGCGT
GATTGGATTTTAGCGCGGGGTGATGTCGAGGAATATCAAGGGCGCGATATTAAACCTGAAGATAATGGTCAGCTTGGCCC
TGATCGTTCAGGAGGGGTACCCCCGTTTCCTAATGTTAATCATCGGCCTTTGCAGGCTAAGGCCGGTGGCAATGTTACCC
AGATGCATTATGCTAAAAAAGGCATCGTAACACCAGAAATGGAATATATCGCCATTCGCGAAAATTGTGGCCGCGCCCAA
ATGAAAGAGGCGATGGAACGCGATGGTGAGGACTTTGGGGCTAATATCCCTGATTTTATTACACCGGAATTTGTTCGGGA
TGAAGTCGCTAGCGGTCGTGCCGTTATTGCAGCCAACATTAATCATCCAGAAGCAGAGCCGATGGTGATTGGCCGGAATT
TTCTGGTCAAAATTAATGCGAATATTGGTAACTCGGCTGTTGCTTCTGATGTTGCGGCCGAAGTTGAAAAAATGGTGTGG
TCTATCCGTTGGGGTGCCGATACCGTTATGGATCTATCAACGGGCCGCAATATCCATGACACCCGCGAATGGATTCTGCG
TAACAGCCCTGTTCCCATTGGAACGGTGCCGATTTATCAGGCATTAGAAAAAGTAGGCGGCATTGCTGAAGACCTGACAT
GGGAAATCTTCCGCGATACTTTGATCGAGCAGGCTGAACAGGGTGTTGATTATTTCACCATTCATGCCGGTGTTCGTCTC
GCCTATATCCCCTTAACTGCGCGTCGTGTTACAGGGATCGTCAGCCGTGGTGGTTCTATCATGGCGAAATGGTGTTTAGC
CCATCATCAGGAAAATTTCCTTTACACGCATTTTGAAGATATTTGCGAAATTCTGAAACGCTATGACATCGCTTTTTCCT
TAGGTGATGGTCTGCGTCCGGGATCTATTGCCGATGCCAATGATCGCGCCCAGTTTGCTGAACTGGAAACCTTAGGCGAA
CTGACCGAAATTGCATGGAAGCATGATGTTCAGGTGATGATCGAAGGCCCAGGACATGTTCCGATGCACAAGATCAAACC
GAATATGGATAAGGAACTGATCGCCTGTCATGAAGCGCCTTTCTATACGCTTGGGCCTTTGACGACCGATATTGCACCGG
GCTATGATCACATCACCTCGGCGATCGGGGCGGCTATGATTGGCTGGTTTGGAACCGCCATGCTGTGCTATGTTACCCCA
AAAGAACATCTGGGGTTACCTAATCGTGACGATGTTAAAGTCGGTGTTGTCACCTATAAACTGGCAGCCCATGCGGCCGA
TTTAGCCAAGGGACATCCGACAGCAAGATTGCGCGACAATGCGTTGTCCCGTGCGCGTTTTGATTTCCGTTGGAAAGATC
AATTTAACTTAAGTCTTGATCCTGATACGGCAGAATCTTTCCACGACCAGACTTTACCAGCAGAAGGCGCTAAATCAGCC
CATTTCTGTTCCATGTGTGGCCCTAAATTCTGTTCTATGAAAATAACGAAAGAAGTGCGCGAATTTGCTTCCCAAGGTAT
GGAAGAAATGAGCGAACAATTCAAAGAACAGGGTAGTGAAATTTACCTGCCTGCGGCAGAATAA

Protein sequence :
MADTSDQNIDDIPNHVTTGPIRGSRKIYVEGKKGVRVAMREIALEPSAKEQPVRVYDCSGPYTDPNIKIDIRQGLKPIRR
DWILARGDVEEYQGRDIKPEDNGQLGPDRSGGVPPFPNVNHRPLQAKAGGNVTQMHYAKKGIVTPEMEYIAIRENCGRAQ
MKEAMERDGEDFGANIPDFITPEFVRDEVASGRAVIAANINHPEAEPMVIGRNFLVKINANIGNSAVASDVAAEVEKMVW
SIRWGADTVMDLSTGRNIHDTREWILRNSPVPIGTVPIYQALEKVGGIAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVRL
AYIPLTARRVTGIVSRGGSIMAKWCLAHHQENFLYTHFEDICEILKRYDIAFSLGDGLRPGSIADANDRAQFAELETLGE
LTEIAWKHDVQVMIEGPGHVPMHKIKPNMDKELIACHEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTP
KEHLGLPNRDDVKVGVVTYKLAAHAADLAKGHPTARLRDNALSRARFDFRWKDQFNLSLDPDTAESFHDQTLPAEGAKSA
HFCSMCGPKFCSMKITKEVREFASQGMEEMSEQFKEQGSEIYLPAAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 68
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 68
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 67