|
Name : Theth_1070 (Theth_1070) Accession : YP_004660246.1 Strain : Thermotoga thermarum DSM 5069 Genome accession: NC_015707 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 1052371 - 1052820 bp Length : 450 bp Strand : + Note : COGs: COG0691 tmRNA-binding protein; InterPro IPR000037:IPR020081; KEGG: tle:Tlet_0666 SsrA-binding protein; PFAM: SmpB protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein DNA sequence : ATGGAGATAATTGCGGTTAACAAAAAAGCCAACGATTATGAGATTATAGAAAAATACGAAGCAGGAATAGAGCTAAAAGG TACGGAAGTGAAATCCCTCCGGGAAAAAAACGTCAGCTTTAAAGATTCCTTTTGCCGCATCAAAGATGGGGAAGTTTACC TTTTGAATCTTCACATAAGCCCTTACAGATTTGCCAACATCTTCAACCATGATCCGGAAAGACCAAGAAAGCTTTTACTC CACAAGAGGGAAATCAAAAGACTGAGTGGTAAGCTTTCGGCTGGAGGTTATACACTCATACCAACTAAGATTTATTTCAA CGACAAAGGTAAGGTAAAGGTTGAAATAGCGCTTGCGAAAGGAAAGAAAAAGTACGACAAGCGTCAAGAGATAAAAGAGA AGGAGATAGAAAAACGCTTAAGGTCGATCATGAAATACAGGGGAAGATGA Protein sequence : MEIIAVNKKANDYEIIEKYEAGIELKGTEVKSLREKNVSFKDSFCRIKDGEVYLLNLHISPYRFANIFNHDPERPRKLLL HKREIKRLSGKLSAGGYTLIPTKIYFNDKGKVKVEIALAKGKKKYDKRQEIKEKEIEKRLRSIMKYRGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 6e-25 | 52 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 3e-26 | 52 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 7e-16 | 42 |
