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Name : Runsl_5791 (Runsl_5791) Accession : YP_004659180.1 Strain : Genome accession: NC_015705 Putative virulence/resistance : Resistance Product : Rhodanese-like protein Function : - COG functional category : R : General function prediction only COG ID : COG0491 EC number : - Position : 19219 - 20634 bp Length : 1416 bp Strand : - Note : PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain; COGs: COG0730 permease; InterPro IPR002781; KEGG: cat:CA2559_12623 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: Membrane protein DNA sequence : ATGTTCTTCCAACACATTTATGACAAAACCTTAGCGCAGGCGAGTTACCTCATAGGCTGCCAAAAAACCGGCGAAGCCAT CGTAATCGATCCCAAAAGAGACGTAGATACGTATTTGGAGATCGCCAAACAAAACGGCTTACGCATTACTCACGTGACCG AAACCCACATTCACGCCGATTTTCTGTCGGGGGCCCGGGAATTGGCCGCCATCACGGGAGCAACCATGTATCTTTCCGAC GAAGGAGGGGAAGGCTGGGAATATGAATTTGACCACGTTGGGCTGAAAAATGGAGCTGTCATCATCGTGGGCAACCTGAC CCTGGAAGTGATTCATACGCCGGGACATACCCCCGAAAGTATCAGCTTTCTGTTGACCGATAAGCCGGCGTCGTTACAAC CGGTGATGTTGTTTACAGGAGATTTTGTATTTGTGGGTGATATTGGTCGTCCCGACTTATTGGAAAAAGCGGCCGGAATG CTCGGAACGCAGGATGCCGGAGCGCTGCAAATGTATCATTCCATCCAAAAATTCAACACTTTACCCGATTTCTTACAGGT ATGGCCGGGCCACGGTGCCGGGTCGGCCTGCGGAAAAGCCTTGGGGGCGGTACCAAGCTCAACGGTTGGCTACGAGAAAA TCAGAAACTGGGCTTTTCAATACGATGATGACCAAGAGGGCTTTATAAAATACCTGCTGACGGACCAACCGGAGCCCCCC AAATATTTTGCCACGATGAAAAAACTCAATAAAGTAAATCGTCCGTTGCTGACGGCAGTGCCGACGCAAAAGAAACTGAC GGGAGAAGAAGTAAAAGAGGCAATGGCCCAAGGCATCAAACTCATTGATACGCGCAACAAAGTGGAATTTGCCGCCGGCT TCCTGCCCGATAGCCTCAATATTCAGGGTAATAATGCGTTTGCGACCTGGATGGGTTGGTTTATTAATTATGAAGAACCT TTTATGCTGGTCGCCGCAGAAACTCAAATCGAGGACCTTACCCGTAAACTCATGCGGATTGGCTTGGACAACGTGTATGG TTACATTTCAGATGTCACCTCGGCAGGCGTTGAATTAGCGAAAAGCGAGGTAATTGAAATGGATGAATTTAAGACGTACT TAAACCGCGAAGATGTTCAGGTCATAGACTTACGCGGTGTGGCAGAATACAACGCCGGGCATATCGAAGGCGCGGAAAAT GTGTTTATTGGCACGCTGCCAACAAACCTTGAAAAAATCAGCCGCGATAAGCAAGTGGTCATTCACTGTCAGGGCGGCGA CAGAGCGGCAATAGGGTATTCCATTTTAGCTAAAAACGGCTTTAAAAATGTAAAAAATTACTCGGGGGGTATCATTGAAT GGGTAAACAAAGGAAACCCGTTGGAAACAGAATTGGTAGAGGCAGCAGTGTGCTGA Protein sequence : MFFQHIYDKTLAQASYLIGCQKTGEAIVIDPKRDVDTYLEIAKQNGLRITHVTETHIHADFLSGARELAAITGATMYLSD EGGEGWEYEFDHVGLKNGAVIIVGNLTLEVIHTPGHTPESISFLLTDKPASLQPVMLFTGDFVFVGDIGRPDLLEKAAGM LGTQDAGALQMYHSIQKFNTLPDFLQVWPGHGAGSACGKALGAVPSSTVGYEKIRNWAFQYDDDQEGFIKYLLTDQPEPP KYFATMKKLNKVNRPLLTAVPTQKKLTGEEVKEAMAQGIKLIDTRNKVEFAAGFLPDSLNIQGNNAFATWMGWFINYEEP FMLVAAETQIEDLTRKLMRIGLDNVYGYISDVTSAGVELAKSEVIEMDEFKTYLNREDVQVIDLRGVAEYNAGHIEGAEN VFIGTLPTNLEKISRDKQVVIHCQGGDRAAIGYSILAKNGFKNVKNYSGGIIEWVNKGNPLETELVEAAVC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | BAB83478.1 | - | Not tested | SCC 12263 | Protein | 3e-84 | 43 |
| unnamed | BAA86645.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 4e-83 | 42 |
| SACOL0046 | YP_184956.1 | metallo-beta-lactamase | Not tested | Type-I SCCmec | Protein | 5e-83 | 42 |
