|
Name : Runsl_5929 (Runsl_5929) Accession : YP_004659113.1 Strain : Genome accession: NC_015704 Putative virulence/resistance : Resistance Product : copper-translocating P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : 3.6.3.4 Position : 48681 - 50726 bp Length : 2046 bp Strand : - Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-transloc DNA sequence : ATGGAACACCAACATCATCACTCGACCAATGATAAGCCTGAAAACCTCACTGGTCATCACGAACATAGTAGTAACGTAGG GCATAAGAGTAATCCGAAACATGGCGAAATGGGGCATAATCATTTGGCCATGATTGAAGATTTTAAACGGCGTTTCTACG TGAGTTTAGGATTGACGGTTCCGATTTTGGTGCTGTCTGACATGATTCAACATTGGTTGGGCTTTGAATTAGATTTCGTG GGAAGAAAATACCTGCTTTTGGCACTCTCGTCGGTTTTGTTTGGGTATAGTGGAAAACCCTTTTTAGAAGGGTGTATGGA TGAACTCAAAAGCCGCCATCCCGGCATGATGACCCTCATTGCCATGGCCATTACTATTGCTTTTGTGTATAGCGTCGCCA CCGTTTTCGGCTTTCAGGGCATGGATTTCTTTTGGGAGCTGGCTACGCTGATTGTAATTATGTTGTTGGGACATTGGCTC GAAATGCGTTCCGTAGCAAATGCTTCCAAAGCTCTCGAACTTCTCATTCAAATGATTCCTGCCGAAGCCCACGTGATACA CGGGGAAATGATACACGATATGCCTTTGAAAGAAATAAAACAAGACTTTCGAATTTTGGTACGCCCAGGCGAAAAGATTC CCGTGGACGGTACGGTTTTGAAAGGAGAAAGTTACCTCAACGAGTCCATGCTTACAGGCGAATCCGCCCCTGTCCTCAAA CAAGCGGGAGCAAAAGTAATCGCAGGAGCATTAAACGGAAACGGTTCACTCGAAATAAAGGTAGAACAAACGGGCGAAGG AACTTACCTTGCTAAGGTGATCCAAATGGTGCAAGATGCCCAAAATACCAAGTCAAACACGCAAAGGCTGGCAGATCGTG CTGCCTTTTGGCTCACCATGGTTGCCTTAGTAATGGGTTTTGGTACGTTGACAGCATGGCTTATTATGGGGCAATCGTGG GCGTATGCCGTGGAGCGTATGGTAACGGTCATGGTCATTTCCTGCCCTCATGCTTTGGGTTTGGCAATTCCGCTGGTAGT AGCCATATCTACCTCCCTTGCGGCCAAAAATGGGTTATTGGTTCGTAACCGCACCGCCTTTGAAAATGCCCGAAAGATTT CAATGCTTATTTTTGATAAAACAGGAACGCTCACCACGGGTATTTTTGGAGTCACTCGTATAAGTAGTTTTCTGTCTAAT CTTACCAAAAACGATCTTTTAGCGTTGGCAGCAGCGTTGGAACAAAACTCAGAGCATCCCATTGCTACGGGTATCATTTC CGAAGCCAAAGCCCAAAAAGTATCCATCCCAAATGTAGAGGATTTTCAAGCAATCACAGGAAAAGGTGTTTCGGGAAAAG TGAATCAAAAAAATGTATGGGTTGTAAGCCCAGGTTATTTGAGAGAAAACAACCTTAATATTCCGGAAGTGGCAGTCGCT GATGCTTCCGAAACGACCGTTTTTGTGTTGATTGACAACCAATTAGCTGGCTTTATTTCCCTTGCTGACCAAATCAGGGA ATCATCCGCCGAGGCTATCCAAAACTTAAAAAAGCAAGGTATAAAAACGTTCATGCTGACAGGCGACAATCAAAAAGTAG CCGAAACCGTCAGCCAAAAATTAGGCATGACGGGCTATATGGCCGAAGTATTGCCTCATCAAAAGTTAGAAAAAATAAAG GAACAACAAGCCAAAGGGGAGTTTGTGGCCATGACAGGTGACGGGGTGAACGATGCTCCTGCCCTTGCCCAAGCTGACAT AGGTATCGCCATTGGTTCGGGTACAGATGTGGCCGCCGAAACCGCCGACATCATTTTGGTAAACAGCGACCCAAAAGACG TAGCTTCTTTGATTGAATTTGGACGTTCCACACACCAAAAAATGATTCAAAACTTAATTTGGGCTACCGCTTACAATGCT GTCACGTTACCATTAGCCACAGGTTTCGTACCAGAAGTCGTTATTTCTCCCGCCATTGGTGCCGTATTTATGAGTTTGAG TACGATTATCGTGGCCATTAATGCGCAGACTTTGCGGTTTAAATAA Protein sequence : MEHQHHHSTNDKPENLTGHHEHSSNVGHKSNPKHGEMGHNHLAMIEDFKRRFYVSLGLTVPILVLSDMIQHWLGFELDFV GRKYLLLALSSVLFGYSGKPFLEGCMDELKSRHPGMMTLIAMAITIAFVYSVATVFGFQGMDFFWELATLIVIMLLGHWL EMRSVANASKALELLIQMIPAEAHVIHGEMIHDMPLKEIKQDFRILVRPGEKIPVDGTVLKGESYLNESMLTGESAPVLK QAGAKVIAGALNGNGSLEIKVEQTGEGTYLAKVIQMVQDAQNTKSNTQRLADRAAFWLTMVALVMGFGTLTAWLIMGQSW AYAVERMVTVMVISCPHALGLAIPLVVAISTSLAAKNGLLVRNRTAFENARKISMLIFDKTGTLTTGIFGVTRISSFLSN LTKNDLLALAAALEQNSEHPIATGIISEAKAQKVSIPNVEDFQAITGKGVSGKVNQKNVWVVSPGYLRENNLNIPEVAVA DASETTVFVLIDNQLAGFISLADQIRESSAEAIQNLKKQGIKTFMLTGDNQKVAETVSQKLGMTGYMAEVLPHQKLEKIK EQQAKGEFVAMTGDGVNDAPALAQADIGIAIGSGTDVAAETADIILVNSDPKDVASLIEFGRSTHQKMIQNLIWATAYNA VTLPLATGFVPEVVISPAIGAVFMSLSTIIVAINAQTLRFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0105 | YP_252020.1 | hypothetical protein | Not tested | SCCmec | Protein | 7e-93 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Runsl_5929 | YP_004659113.1 | copper-translocating P-type ATPase | BAC0629 | Protein | 2e-173 | 57 |
| Runsl_5929 | YP_004659113.1 | copper-translocating P-type ATPase | BAC0079 | Protein | 2e-135 | 43 |
