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Name : Runsl_0776 (Runsl_0776) Accession : YP_004654348.1 Strain : Runella slithyformis DSM 19594 Genome accession: NC_015703 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 915357 - 916667 bp Length : 1311 bp Strand : + Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase, central domain; UDP-glucose/GDP-mannose dehydrogenase, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; COGs: COG0562 UDP-galactopyranose m DNA sequence : ATGGTCAGATTAAGAAACAGAATGTATCAGCAACTCCTCCAAAAAGAAAAACAAATCGCGATTATCGGTCTTGGATATGT AGGATTACCCATTGCCCTCGAATTCGCCAACTATTTTCGAGTGATTGGTTTTGACATTAACCAACAGCGCATTGACATGA TGAAGGCAGGACAAGACCCTTCTCATGAAATGGACCCGAGTGTTTTTGAAGGAAAAGATATTTATTTTACGGCCAATCCG GACGATCTGCAACAGGCCCATTTTTTTATCGTGGCCGTTCCTACGCCCGTTGATGATTACAAAGTCCCCGATCTGAAACC GCTCATCGGCGCGTCGCACGCCATCGGGAAGGCCCTCAAAAAGGGCGATTACGTGATTTATGAGTCGACGGTTTATCCCG GATGTACCGAAGAAGATTGTCTGCCTATTCTGGAAGCCGAGTCAGGTCTGACCTTAGGCGCGGATTTTAAAATAGGCTAC TCTCCCGAGCGCATCAACCCCGGGGACAAAGAAAGAACCATTGATAAAATCCTGAAAATAGTTTCCGGAAGCGATGCCGA AGCGTTGGAGGAAATTGCCTTAGTGTATGGCAAAATCATTACGGCGGGTATCTACAAGGCTCCTACGATTAAAGTGGCCG AGGCGGCTAAGGTCATCGAAAATACCCAGCGTGACCTCAATATTTCATTGATGAATGAATTGGCCATTATTTTCGACCGT ATGGGTATTGATACCAAAGATGTGATCGAAGCAGCGGGGACCAAATGGAATTTTATAAAACTATACCCGGGGCTGGTGGG AGGTCATTGCATTGGCGTTGATCCGTATTATCTGCTGTATAAAGCCAAAAAATTGGGCTATGACCCACAAGTCATTCACA GCGGACGCCGTATTAATGACGGTATGCCCGCCTTCATTGCCAAACGTCTGGTGCAGATGCTGATCCAAAAAGGGAAGAGT CCTCAAAATGCAAAAGTGTTGATGATGGGAATCACCTTCAAAGAAAATGTGTCTGATATTCGTAACTCAAAAGTGGCGGA TCTGGTGAAGGAATTGATGAGTTTTTCGATCAATGTACACCTTGTGGATCCCTATGCCTCCCCCAATGAAGTAGCCCATG AATACAGTCTGACCCTCATTGACAAACCTTCTACCGAGTACGATGCCGTGATTGTTTCGGTAGGGCACGATCATTACAAA GCGTTAGACATTGCCTATTTCAAATCCATCATGACCGACAAACCCATTCTGATGGATTTGAAAGGAATGTATAAAAATAC CGATGAAACCATTACGTATTGGCGTTTATAA Protein sequence : MVRLRNRMYQQLLQKEKQIAIIGLGYVGLPIALEFANYFRVIGFDINQQRIDMMKAGQDPSHEMDPSVFEGKDIYFTANP DDLQQAHFFIVAVPTPVDDYKVPDLKPLIGASHAIGKALKKGDYVIYESTVYPGCTEEDCLPILEAESGLTLGADFKIGY SPERINPGDKERTIDKILKIVSGSDAEALEEIALVYGKIITAGIYKAPTIKVAEAAKVIENTQRDLNISLMNELAIIFDR MGIDTKDVIEAAGTKWNFIKLYPGLVGGHCIGVDPYYLLYKAKKLGYDPQVIHSGRRINDGMPAFIAKRLVQMLIQKGKS PQNAKVLMMGITFKENVSDIRNSKVADLVKELMSFSINVHLVDPYASPNEVAHEYSLTLIDKPSTEYDAVIVSVGHDHYK ALDIAYFKSIMTDKPILMDLKGMYKNTDETITYWRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-97 | 52 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 7e-97 | 52 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-91 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Runsl_0776 | YP_004654348.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 3e-97 | 52 |
