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Name : Runsl_5413 (Runsl_5413) Accession : YP_004658836.1 Strain : Runella slithyformis DSM 19594 Genome accession: NC_015703 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 6279633 - 6280040 bp Length : 408 bp Strand : + Note : PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; COGs: COG0253 Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; InterPro IPR001653; KEGG: dfe:Dfer_5091 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; SPT DNA sequence : ATGAAGGCCGATACGCCGTCCGCTGGAAAAAGCTATAATTTTACTAAAACAATGACGAATGAGTTAATCAAGCTGGTAGA TGCTGAGTTCGCCGGAAGACGCGACAGCCATCCTGCTTTCGGAGCGGGCGACACTATCAGTGTTCACCTCAAAATTATTG AAGGTGCCAAAGAACGTATTCAGGTATTTACCGGAACCGTTATCCAACGTCGTAACAACGGAGGAAACGGCGAAACCTTC ACGGTTCGTAAAATTTCAAACGGTGTAGGCGTTGAGCGTATCATTCCTATTTTATCGCCAAGCATTGACAAGATCGAAGT CATTCGTCGCGGTAAAGTACGTCGTGCACGTTTGTTCTATCTTCGTGGTAAGCAGGGTAAAGCCGCTCGTGTGAAAGAAA AGAAATAG Protein sequence : MKADTPSAGKSYNFTKTMTNELIKLVDAEFAGRRDSHPAFGAGDTISVHLKIIEGAKERIQVFTGTVIQRRNNGGNGETF TVRKISNGVGVERIIPILSPSIDKIEVIRRGKVRRARLFYLRGKQGKAARVKEKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 2e-26 | 65 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 2e-21 | 49 |
