|
Name : Runsl_5321 (Runsl_5321) Accession : YP_004658749.1 Strain : Runella slithyformis DSM 19594 Genome accession: NC_015703 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 6186041 - 6187357 bp Length : 1317 bp Strand : + Note : PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family DNA sequence : ATGTACGCCCTCATCGACTGTAATAATTTTTACGCTTCCTGCGAGCGCGTCTTTAGGCCCGATTTGGAAAAAAAACCCGT AGTGATCCTCTCCAACAATGATGGCTGTATCATTTCCCGTTCCGACGAAGCCAAGGCGTTGGGTATTGGTATGGGGGTAC CTCTTTTTCAGATACAATCGTTGGTCAAACGGCACGATATTACGGTTTTTTCGTCAAATTATGCGCTCTATGGCGACTTT TCCAATCGCGTCATGCAAAGCCTTTTCCAACTCGTTCCCCAACTCGAAGTGTATTCCATCGACGAGGCTTTTCTGGATCT GCGGCAAATGCCCTATCATGACCTTTACGCGTTGGGTCAGGATATCCGGCACAAAATCCGGCAGTGGACGGGCATCCCGG TCTCGCTGGGCATTGCCCCGACCAAGACCTTGGCCAAAGCCGCCAATCGCTACGTGAAAGCACACGTCAAAGAAGAGGGC GTATTTGTCATTGAAGATAATTTTACGGCCGATATTGTCCTCGCCGCTACGCCCATTGAAGAGGTTTGGGGCGTGGGTCG GCGCTACGGGCGTTTTTTGGTCAGCCACGAGATCCGCACGGCCTTTGATCTTGTACAGATGCCCGATGCATGGATTCAAC AACACCTCAAAATTGTGGGTCGGCGCATGGTACGCGAGCTGCGCGGTGAGGTTTGCTACAGTTTGGACCTTGAACCGCAC CCTAAAAAAGGCATTTGTGTGTCGCGCTCCTTTCAAAATACTGTCATTGATGTACTTTCCATTCAGGAAGCGGTAGCCAC GTTTGCCGCACGTTGCGGTGAAAAACTGCGCAGGCAAAAAAGTCGCGCAAATATCCTGCATCTTTTTTTGTTCACCAACC CGCACCACGAGAACGACCCGCAGTATTTCGGCTCTAAAGTTCTTCAATTTCCCACCGCCACCAACAGCAGCTTTGACCTG GTAGCCATGGCGCATCGGGCGCTGGACCTCGTGTTTAAAGCAGGGTATCGCTACAAAAAAGTGGGGGTTATGGTAAGCGG CATTGTGCCCGAAAATACTATTCAAACGGCTTTATTTGATGTACATGAACCCAAACGGCTCAAAGACCACCGTATTTTTC AAACGGTAGATGCCCTCAACCGTACCTTGGGACGTGATAAGATACGCATCGCTGCTCAGGGCAACGGCCCATCAACTCAT CAAGCCTTTCGGTCGCCGTGCTACACCACGCGTTGGGAAGATATGTTGGTCATAGACGAGCGTATTAATTTTCGGGGAAA ACAGGTCAGGGGTAGCTTGGGGCGTAGCTTACAGTAA Protein sequence : MYALIDCNNFYASCERVFRPDLEKKPVVILSNNDGCIISRSDEAKALGIGMGVPLFQIQSLVKRHDITVFSSNYALYGDF SNRVMQSLFQLVPQLEVYSIDEAFLDLRQMPYHDLYALGQDIRHKIRQWTGIPVSLGIAPTKTLAKAANRYVKAHVKEEG VFVIEDNFTADIVLAATPIEEVWGVGRRYGRFLVSHEIRTAFDLVQMPDAWIQQHLKIVGRRMVRELRGEVCYSLDLEPH PKKGICVSRSFQNTVIDVLSIQEAVATFAARCGEKLRRQKSRANILHLFLFTNPHHENDPQYFGSKVLQFPTATNSSFDL VAMAHRALDLVFKAGYRYKKVGVMVSGIVPENTIQTALFDVHEPKRLKDHRIFQTVDALNRTLGRDKIRIAAQGNGPSTH QAFRSPCYTTRWEDMLVIDERINFRGKQVRGSLGRSLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 4e-67 | 41 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 4e-67 | 41 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 3e-66 | 41 |
