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Name : Runsl_5312 (Runsl_5312) Accession : YP_004658741.1 Strain : Runella slithyformis DSM 19594 Genome accession: NC_015703 Putative virulence/resistance : Virulence Product : ATPase AAA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 6178152 - 6180677 bp Length : 2526 bp Strand : - Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase associated with various cellular activities (AAA); UvrB/uvrC motif; InterPro IPR014985; KEGG: sli:Slin_1369 WbqC-like family protein; PFAM: DNA sequence : ATGGAAGCAAAATTTTCAAACCGCGTAAAAGAAGTCATTTCACTCAGCCGTGAAGAAGCCTTGCGGCTGGGGCATGATTA TATCGGCACCGAGCATCTTATTCTGGGAATGATAAGAGAAGGAGAAGGAGTAGCGTTGGCTTTATTAAAGAAACTGGGCG TTTCTTTGGAAGAATTGCGCGTAACCATCGAGCAGGTTACGAAAGGTACCGCCACCAACAACGTGAAAAATCTGGCCAAT ATTCCATTGACCCGGCAATCTGAAAAGGTGTTAAAAATCACCTACTTAGAAGCAAAAATTTTTAAAAGCCCACTTATAGG TACGGAGCACCTGCTACTGTCCATTCTGCGTGACCCCGATAACCTGGCCTCGCAGATTTTAGCCAAGTTCAATGTAAACT ATGAAATCGTTAAGGAAATGTTAGAGTATCAATCATCAGGCACCAAACCGCACGCGGGGCCCGAAACTGACGACGACGAC GAACGGAGTATGTTCGGAGGCGGTGCTCAGCAAGGCAAAGACCCCAAAAATACCGAAAAATCTCGTACACCTGTCTTAGA CAATTTCGGTAGAGACCTAACCAAGATGGCAGAATTGGGTAAATTAGACCCTATCGTTGGCCGTGAGAAAGAAATTGAAC GTGTAGCGCAGGTGCTGAGCCGCCGTAAGAAAAACAACCCTGTGCTCATCGGAGAGCCGGGTGTTGGGAAGACGGCTATT GCTGAAGGCTTAGCGCTGAGAATTGTACAAAAGAAAGTTTCGCGGGTGCTGTTCGGCAAACGCGTCGTAACGCTGGATTT GGCCTCGCTCGTAGCGGGAACTAAATATAGAGGGCAGTTTGAAGAGCGTATGAAAGCGGTCATGAATGAACTGGAAAAAT CACCCGAGGTGATCCTGTTCATTGATGAGCTGCACACGATCGTCGGGGCCGGCGGTGCTTCCGGTTCGCTGGATGCTTCC AATATGTTCAAACCTGCTTTGGCCCGGGGCGACATCCAATGCATTGGAGCCACCACATTGGATGAGTATCGTCAATATAT TGAGAAAGACGGCGCGTTGGCCCGTCGTTTTCAGATCGTGATGGTCGATGCCCCAAGCGTGGAAGAAACCATTGAAATTC TGAATAACATCAAAGATAAGTACGAAGACCACCACCACGTAAACTATACGGACGAAGCTATTGCGCAGGCTGTGAAACTG TCGGAACGATATATCACCGACCGCTTCCTGCCCGACAAAGCCATCGACGTCATGGACGAGGTAGGAGCCCGCGTACACAT CAGCAATATCACCGTTCCGGAAGATATCGTAGTGCTGGAACAACAGATTGAGGAGGTCAAGAAGCAGAAAAACCTCGTGG TGAAAAGCCAGAAATACGAGGAAGCCGCTCAACTCCGCGACCGTGAGAAGAAGCTTTTAGACCAACTTGACCGTGCTAAG ATCGCCTGGGAAGAGGAAACCAAGAAGCGGCGTTATACCGTTACAGACGAAAACGTAGCTGAAGTGGTAGCTATGATGAC GGGGATTCCGGTCAATCGGGTAGCACAAAATGAAGGCCAGAAATTGCTCGGTATGGGTGATGAACTCAAAAATCGGGTGA TTGGCCAAAACAACCCGATCGAAAAACTGACCAAAGCTATTCAACGGACTCGGGTAGGATTGAAAGATCCTAAAAAACCC ATCGGCTCGTTTATTTTCCTTGGTCCGACGGGCGTGGGAAAAACGGAATTAGCAAAGGTATTGGCGACTTACCTGTTTGA TAAGGAAGATGCCTTGGTACGGATTGATATGAGCGAATACATGGAGAAGTTCAGCGTATCGCGCCTCATCGGAGCGCCTC CGGGCTACGTAGGATATGAAGAAGGCGGGCAATTGACCGAAAAGATTCGTCGTAAGCCGTACAGTGTCGTATTGTTGGAT GAGATCGAAAAAGCGCACCCGGATGTATTCAATATTCTGCTTCAAGTGCTCGACGACGGTATTTTGACGGATGGATTGGG CCGTCGTGTAGACTTCCGTAATACCATCATCATCATGACGTCCAACATTGGAGTGCGTGATCTGAAAGATTTTGGTTCGG GCATCGGTTTTGCGACCAAAGCCAAATCCGAAAATCAGGATGATCTGATGAAGAGTACCATTCAGAGCGCGTTGCGTAAA GCATTTTCTCCTGAATTCCTGAACCGTTTGGATGATGTGATCGTATTCAATTCATTGCAGCGCGAAGATATTCACCGCAT TATTGATATCTCACTGGGTAAACTGTTCAACCGCGTAACCAACCTTGGCTATCAGGTGGAACTGACGGAAAAGGCCAAAG ACTTTTTGTCGGAAAAAGGCTATGACCAACAGTACGGTGCGCGTCCGCTTAACCGCGCGATCCAAAAATACCTTGAAGAT CCCGTCGCGGAAGAAATTCTTAAAGGAGATTTGCGGGAAGGAGATACGCTCATGGCCGACCATGAAGACGGAGCCGAAAC ACTGGTGATTACGGTTAGAAAAAAAGAAGCGGAGGTCATTAATTAA Protein sequence : MEAKFSNRVKEVISLSREEALRLGHDYIGTEHLILGMIREGEGVALALLKKLGVSLEELRVTIEQVTKGTATNNVKNLAN IPLTRQSEKVLKITYLEAKIFKSPLIGTEHLLLSILRDPDNLASQILAKFNVNYEIVKEMLEYQSSGTKPHAGPETDDDD ERSMFGGGAQQGKDPKNTEKSRTPVLDNFGRDLTKMAELGKLDPIVGREKEIERVAQVLSRRKKNNPVLIGEPGVGKTAI AEGLALRIVQKKVSRVLFGKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKSPEVILFIDELHTIVGAGGASGSLDAS NMFKPALARGDIQCIGATTLDEYRQYIEKDGALARRFQIVMVDAPSVEETIEILNNIKDKYEDHHHVNYTDEAIAQAVKL SERYITDRFLPDKAIDVMDEVGARVHISNITVPEDIVVLEQQIEEVKKQKNLVVKSQKYEEAAQLRDREKKLLDQLDRAK IAWEEETKKRRYTVTDENVAEVVAMMTGIPVNRVAQNEGQKLLGMGDELKNRVIGQNNPIEKLTKAIQRTRVGLKDPKKP IGSFIFLGPTGVGKTELAKVLATYLFDKEDALVRIDMSEYMEKFSVSRLIGAPPGYVGYEEGGQLTEKIRRKPYSVVLLD EIEKAHPDVFNILLQVLDDGILTDGLGRRVDFRNTIIIMTSNIGVRDLKDFGSGIGFATKAKSENQDDLMKSTIQSALRK AFSPEFLNRLDDVIVFNSLQREDIHRIIDISLGKLFNRVTNLGYQVELTEKAKDFLSEKGYDQQYGARPLNRAIQKYLED PVAEEILKGDLREGDTLMADHEDGAETLVITVRKKEAEVIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Runsl_5312 | YP_004658741.1 | ATPase AAA | VFG0079 | Protein | 0.0 | 52 |
| Runsl_5312 | YP_004658741.1 | ATPase AAA | VFG0080 | Protein | 9e-151 | 49 |
