Gene Information

Name : Runsl_5139 (Runsl_5139)
Accession : YP_004658573.1
Strain : Runella slithyformis DSM 19594
Genome accession: NC_015703
Putative virulence/resistance : Unknown
Product : transposase IS4 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5980316 - 5981332 bp
Length : 1017 bp
Strand : -
Note : PFAM: Transposase DDE domain; InterPro IPR003675; KEGG: slg:SLGD_00275 hypothetical protein; PFAM: Abortive infection protein; SPTR: uncharacterized protein

DNA sequence :
ATGCCAAAAATACACTTTTTTACCCAAGCCGAAAATTTACCGCCCAAGGCACAAAGAAATCCACCAATCCCCAAAGAAAA
ATACCGGTTAACCAACTGGCCTGAATATAATAAGGCATTGATTAACAGAGGCTTTGTCACCCTTTGGCTGAATGAAAAGA
CGTTGACTCAATGGTACTATCAAGGACCTCGTACTCGCGGCGGGCTATTGCGCTATTCAGATCAATGTATCCAAGCAGCC
TTGGCTCTTAAAGCGGCCTTCCGGCTGGCCTTTCGACAAACACAAGGGTTGATTCAGAGTTTATTAGCGATTATGAAGAT
TGACATTCAAGTACCCAGCTACAGTCAGCTTTGTAGGCGACAGGCTCACCTACAGGCCTTCCATACCCCTCAAAAACCTA
CTGATAACCAAGTCAAACCGATTCATCTGGTAGTGGATAGTACGGGATTAAAAGTCTATGGCGAGGGTGAGTGGAAGGTA
CGCAAGCATGGAGCTGATCAACGGCGTACCTGGCGTAAACTGCATTTAGTAGCCGATGAAGCTACTAATACCATCCACGC
TGTTGAGTTGACAACTCATTCCATCAGTGATGCTGAGATGATTAAGCCCTTACTGGCTGATATTGAATGGCCTATCGCTA
AACTAAGGGCAGATGGAGCTTATGACCAAGTCAAAGTTTTTGACGAGTTAGAAAAGCACTGGATTCAGCCTGTGATACCG
CCCCGATCCAACGCAGTCATCTGGACCAGTGAAAACGGAAATGATTTAATACACCCTCGTAATGAGGCCGTTCGTCAGAT
TCGTTTGGTGGGTATAGCAGCATGGAAACAGCAAATTGGCTACCATCGCCGGAGCAAAGCCGAGACGGCTATGTTTCGTT
GGAAGATGATTTTCGGTGAACGGTTGTCGGCTCGATTGGTAACTAATCAACAGACCGAAGCCCAAATCAAAGCCACTTGC
TTAAACCGATTCACCAGATTGGGTATGCCTAAGACAGTCAAACGGTTGCCAACATAA

Protein sequence :
MPKIHFFTQAENLPPKAQRNPPIPKEKYRLTNWPEYNKALINRGFVTLWLNEKTLTQWYYQGPRTRGGLLRYSDQCIQAA
LALKAAFRLAFRQTQGLIQSLLAIMKIDIQVPSYSQLCRRQAHLQAFHTPQKPTDNQVKPIHLVVDSTGLKVYGEGEWKV
RKHGADQRRTWRKLHLVADEATNTIHAVELTTHSISDAEMIKPLLADIEWPIAKLRADGAYDQVKVFDELEKHWIQPVIP
PRSNAVIWTSENGNDLIHPRNEAVRQIRLVGIAAWKQQIGYHRRSKAETAMFRWKMIFGERLSARLVTNQQTEAQIKATC
LNRFTRLGMPKTVKRLPT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAG31792.1 unknown Not tested VPI Protein 3e-44 41