Gene Information

Name : Runsl_4857 (Runsl_4857)
Accession : YP_004658300.1
Strain : Runella slithyformis DSM 19594
Genome accession: NC_015703
Putative virulence/resistance : Unknown
Product : aspartate transaminase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 5607293 - 5608537 bp
Length : 1245 bp
Strand : -
Note : PFAM: Aminotransferase class I and II; KEGG: dfe:Dfer_4253 hypothetical protein; SPTR: uncharacterized protein

DNA sequence :
ATGCAAATCCTGAAAAGCAAACGCCTTGAACATCTGCGGTATGATATCCGAGGCCCCGTGTACGAAAAAGCCCTGGAATT
GGAAAGCCAAGGATACAAGATCTTCAACCTGAATATCGGGAATCCTGCCCCCTTTGGCTTTGATGCTCCTGATGAGATCA
TTCACGACATCATCCTTAACATTCGCAATGCGCAGGGGTATGTAGATTCAAGAGGATTATTTGCGGCGCGGAAAGCGGTC
ATGCACTATACCCAAACACAGGGCATCAAGGGCGTGGATATCAATGATGTATACATTGGCAATGGCGTGAGTGAGTTGAT
CGTCATGTCGATGCAGGCATTGCTCAACGAGGGAGACGAAATTCTGGTACCCTCTCCCGATTATCCGCTTTGGACCACCT
CAGTGGCGCTAAGCGGCGGCAAACCTGTTCATTACATATGCGACGAGCAAAGTGACTGGAATCCCGATCTGGACGATCTG
GAAAGCAAAATTACGCCGCGAACCAAAGGGATCGTGATGATCAATCCCAACAATCCAACGGGAGCTGTATACGATAAAGA
TATTGTGCGTCGCGTGGCTGAAATTGCGGAAAGACATCGGCTGATTCTTTTTTCAGATGAGATATATGATAAAATCCTGT
ACGACGGTGCCGTTCATTATCCCGTAGCGACCATGGTGCAGGATACCCTGTGTGTTACGTTTGGCGGACTCTCCAAAAAC
TACCGTTCGGCGGGTTTTCGAGGTGGTTGGTTGATTTTGAGCGGTGCAAAACACAAAGCTAAATCCTACATTGAAGGACT
GACTTTTTTAGCAAGTATGCGTTTATGTGCCAATGTTCCTACCCAATACGCCATTCAAACGGCGTTGGGCGGTTACCAAA
GCATTCAGGACCTGGTATTGCCAACGGGGCGTTTACACAAGCAGATGAACCTCATCTATGATCGTTTGACGGCCATTCCG
GGCATCAGTTGCGTAAAACCCAAGGGCTCATTGTACGTTTTCCCTCGCATAGATCTTCGTAAGTTTGACTTTAAGAATGA
CGAAGAATTTGTTTTTCAATTATTGGCTGAACAAAAAGTATTGGTCGTTTCCGGAACAGGCTTCAACTATATCAAGCCGG
ACCATTTCCGTATCGTCACATTGCCCAGCGTGGACGAGTTGACCATTGCGATGAATAGAATTGAACAGTTCCTGAACAAT
GCCCGAGTCCATGCCGAAACCGCGGTGGAAGAGTATTTGGTATAG

Protein sequence :
MQILKSKRLEHLRYDIRGPVYEKALELESQGYKIFNLNIGNPAPFGFDAPDEIIHDIILNIRNAQGYVDSRGLFAARKAV
MHYTQTQGIKGVDINDVYIGNGVSELIVMSMQALLNEGDEILVPSPDYPLWTTSVALSGGKPVHYICDEQSDWNPDLDDL
ESKITPRTKGIVMINPNNPTGAVYDKDIVRRVAEIAERHRLILFSDEIYDKILYDGAVHYPVATMVQDTLCVTFGGLSKN
YRSAGFRGGWLILSGAKHKAKSYIEGLTFLASMRLCANVPTQYAIQTALGGYQSIQDLVLPTGRLHKQMNLIYDRLTAIP
GISCVKPKGSLYVFPRIDLRKFDFKNDEEFVFQLLAEQKVLVVSGTGFNYIKPDHFRIVTLPSVDELTIAMNRIEQFLNN
ARVHAETAVEEYLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 7e-115 53
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 7e-115 53
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 7e-115 53
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 7e-115 53