Gene Information

Name : Runsl_4612 (Runsl_4612)
Accession : YP_004658064.1
Strain : Runella slithyformis DSM 19594
Genome accession: NC_015703
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 5320228 - 5320704 bp
Length : 477 bp
Strand : +
Note : PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); InterPro IPR004360; KEGG: psl:Psta_2414 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: G

DNA sequence :
ATGGCTGGAGTAAACAAAGTAATTCTATTGGGTAATTTGGGCAGCGACCCCGAAGTGCGTCACCTGGAAAATGGCTCAGC
AGTGGCTCGCTTCAATATTGCCACTTCAGAAGCCTACACCAATCGCAGCGGCGAACGTGTAGAACAGACAGAATGGCACC
GAATTGAACTGTGGGACAACTTGGCTAAGATCGCCGAGCAATACCTTCGTAAGGGCAATACCGTCTATATTGAAGGAAAA
TTACGCACGGAAACCTGGACGGATAAAGAAGGAAAACAACGGGAAGGAAAAACCGTAAGAGCAAATACGATGCAATTGGT
AGGCGGACGCAACAGCGGAGGTGAAAGTAACGATTCATACACTCAATCTCAGCCCGCGGCCCAGGCGCAGGCCAGCCGCC
CCGCTTCCGCTCCAAAACCTGCCCAACCTATTTCGGCAGACCTCGGGGGAAGCGGTGATGATGATTTACCCTTCTAA

Protein sequence :
MAGVNKVILLGNLGSDPEVRHLENGSAVARFNIATSEAYTNRSGERVEQTEWHRIELWDNLAKIAEQYLRKGNTVYIEGK
LRTETWTDKEGKQREGKTVRANTMQLVGGRNSGGESNDSYTQSQPAAQAQASRPASAPKPAQPISADLGGSGDDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 7e-23 50