Gene Information

Name : Runsl_4459 (Runsl_4459)
Accession : YP_004657916.1
Strain : Runella slithyformis DSM 19594
Genome accession: NC_015703
Putative virulence/resistance : Resistance
Product : rifampin ADP-ribosyl transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5150381 - 5150830 bp
Length : 450 bp
Strand : -
Note : PFAM: DNA/RNA tunnel of bacterial DNA dependent RNA polymerase; COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR014001:IPR007409:IPR006935; KEGG: chu:CHU_2936 restriction enzyme

DNA sequence : 
ATGGAAGAAAACAAAAACAATCGGCAAGCCGGCAGACAGGGTTCGACGCCTTTCGCTCAAACCTATTTTCACGGCACAAA
AGCTGACCTCCGGGTGGGTGACCTCCTTACCGCAGGTTTTCACTCCAACTACGGACCGCGGAAAAATGCAAAATATATTT
TCCTGTCGGCAACTTTAGATGCAGCCATTTGGGGCGCTGAACTGGCGGTTGGGGAAGGCAGGGAAAGGATCTATTTGGTG
GAGCCAACGGGGGATATAGAAGACGACCCGGACTTGACCGACAAAAAATTTCCGGGCAACCCCACCAAATCGTATCGTTC
CACCCAACCGTTTCGGGTCGTGGGAGAAGTTACGGTTTGGAAAGGCCACGCGGCCGAGCAGGTAAAAGCCATGAAAGACG
CCCTGGAAAAACTGAAAGAACAGGGCATTAACTCCCTGAATGATGAATGA

Protein sequence : 
MEENKNNRQAGRQGSTPFAQTYFHGTKADLRVGDLLTAGFHSNYGPRKNAKYIFLSATLDAAIWGAELAVGEGRERIYLV
EPTGDIEDDPDLTDKKFPGNPTKSYRSTQPFRVVGEVTVWKGHAAEQVKAMKDALEKLKEQGINSLNDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arr-2 CAJ77045.1 Rifampin ADP-ribosylating transferase Not tested AbaR1 Protein 2e-32 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Runsl_4459 YP_004657916.1 rifampin ADP-ribosyl transferase AF001493.1.orf0.gene Protein 2e-36 58
Runsl_4459 YP_004657916.1 rifampin ADP-ribosyl transferase AL939114.1.orf1.gene Protein 3e-25 55
Runsl_4459 YP_004657916.1 rifampin ADP-ribosyl transferase NC_010410.6003052.p0 Protein 1e-32 53
Runsl_4459 YP_004657916.1 rifampin ADP-ribosyl transferase FM897214.1.orf2.gene Protein 4e-31 50