Gene Information

Name : Runsl_4366 (Runsl_4366)
Accession : YP_004657827.1
Strain : Runella slithyformis DSM 19594
Genome accession: NC_015703
Putative virulence/resistance : Unknown
Product : transposase IS4 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5051348 - 5052364 bp
Length : 1017 bp
Strand : +
Note : PFAM: Transposase DDE domain; COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR001264:IPR001460; KEGG: dfe:Dfer_4764 glycosyl transferase 51; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase;

DNA sequence : 
ATGCCAAAAATACACTTTTTTACCCAAGCCGAAAATTTACCGCCCAAGGCACAAAGAAATCCACCAATCCCCAAAGAAAA
ATACCGGTTAACCAACTGGCCTGAATATAATAAGGCATTGATTAACAGAGGCTTTGTCACCCTTTGGCTGAATGAAAAGA
CGTTGACTCAATGGTACTATCAAGGACCTCGTACTCGCGGCGGGCTATTGCGCTATTCAGATCAATGTATCCAAGCAGCC
TTGGCTCTTAAAGCGGCCTTCCGGCTGGCCTTTCGACAAACACAAGGGTTGATTCAGAGTTTATTAGCGATTATGAAGAT
TGACATTCAAGTACCCAGCTACAGTCAGCTTTGTAGGCGACAGGCTCACCTACAGGCCTTCCATACCCCTCAAAAACCTA
CTGATAACCAAGTCAAACCGATTCATCTGGTAGTGGATAGTACGGGATTAAAAGTCTATGGCGAGGGTGAGTGGAAGGTA
CGCAAGCATGGAGCTGATCAACGGCGTACCTGGCGTAAACTGCATTTAGTAGCCGATGAAGCTACTAATACCATCCACGC
TGTTGAGTTGACAACTCATTCCATCAGTGATGCTGAGATGATTAAGCCCTTACTGGCTGATATTGAATGGCCTATCGCTA
AACTAAGGGCAGATGGAGCTTATGACCAAGTCAAAGTTTTTGACGAGTTAGAAAAGCACTGGATTCAGCCTGTGATACCG
CCCCGATCCAACGCAGTCATCTGGACCAGTGAAAACGGAAATGATTTAATACACCCTCGTAATGAGGCCGTTCGTCAGAT
TCGTTTGGTGGGTATAGCAGCATGGAAACAGCAAATTGGCTACCATCGCCGGAGCAAAGCCGAGACGGCTATGTTTCGTT
GGAAGATGATTTTCGGTGAACGGTTGTCGGCTCGATTGGTAACTAATCAACAGACCGAAGCCCAAATCAAAGCCACTTGC
TTAAACCGATTCACCAGATTGGGTATGCCTAAGACAGTCAAACGGTTGCCAACATAA

Protein sequence : 
MPKIHFFTQAENLPPKAQRNPPIPKEKYRLTNWPEYNKALINRGFVTLWLNEKTLTQWYYQGPRTRGGLLRYSDQCIQAA
LALKAAFRLAFRQTQGLIQSLLAIMKIDIQVPSYSQLCRRQAHLQAFHTPQKPTDNQVKPIHLVVDSTGLKVYGEGEWKV
RKHGADQRRTWRKLHLVADEATNTIHAVELTTHSISDAEMIKPLLADIEWPIAKLRADGAYDQVKVFDELEKHWIQPVIP
PRSNAVIWTSENGNDLIHPRNEAVRQIRLVGIAAWKQQIGYHRRSKAETAMFRWKMIFGERLSARLVTNQQTEAQIKATC
LNRFTRLGMPKTVKRLPT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAG31792.1 unknown Not tested VPI Protein 3e-44 41