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Name : Runsl_4096 (Runsl_4096) Accession : YP_004657575.1 Strain : Runella slithyformis DSM 19594 Genome accession: NC_015703 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 4728899 - 4730836 bp Length : 1938 bp Strand : - Note : PFAM: Polysaccharide biosynthesis protein; COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR010099:IPR001509:IPR013549; KEGG: dfe:Dfer_4158 domain of unknown function DUF1731; PFAM: Domain of unknown function DUF1731, C-terminal; NAD-depe DNA sequence : ATGATTGAGCAATTGTTGACTAAATATTCTAACCGTTTTGTATCACGACATTTGATATTAGCCATTGATATAACCGTCGT TATTGTCGCTTTTGTAATTGCCTGTATACTCCGAGTCAATTTTGAAATTTATAAAGTCAATTGGTCGATCTATAAATACT ACCTTTTGGGGCTTCTAATCAACCGAATCTTTTTCTTTCTCTATTTTCGGTCGTACACTGGGATTGTTCGCCACACAAGT TTTGAGGATACCTCTCTTATTTTTAAAGCCATCACGACCAGCAGTGTTCTGACACTCGTTTTTTCAATTGCCCTCTCTCG CTCCACCGACAACAACCTCTTCTATATTCCCATCTCCATTCTCATCATTGACTATTTTATATCGCTCTTTTTGATGATCG CCAGCCGATTATTAGTCAAAAATATCTACAAGACCCTAATTATCAATGCCCCGGGAGAGAAGGTAAATGTACTTATTTAC GGAGCGGGAGAATTGGGTATTTTAATCAAAAATACCCTGCTTAGAAATCGGCATAAGAAATACAATATTCTGGGGTTCAT TGATGATAATCCATCATTGAGTTTTAAAACACTCGAAGGGGTAGTTGTCTACCCGGAAGCAGATGCCGACATTCGTTTTA TTGAAGGCAGCAATCCGGAAGACATTGAAGTCATTTTAGCCATTAACGATATCAAGCCTTATCGCAAAAACCAGATCATT GAACGTTTTTTGAAAAGAGATATCATCGTCAAAGTAGCTCCCTCCATCTATGACCGCCTGGGCAATGAAGAATTAAAATC CGAAGAAATACGAAACATTCGCATTGAAGATCTACTGGAGCGTGACCCTATCCAACTAGACAACCAAAGCATCAGCCGTC AGTTGGCCGGAAGAGTAGCGCTGGTGACGGGAGCCGCCGGTTCCATTGGTAGTGAGATCATTCGCCAGTTGATTCGCTTT CAGCCCCAAACGCTGATCCTACTCGACCAGTCGGAATCGGGACTCTATGATTTGGAAAATGAATTGAAGCAACAATTTCA GCACTATTTAGGCGACGGAACGATGGTTATTGTAAAAGTGGCCGATGTCACCGATGAGGTACGAATGAGGCATATTTTCA GCCATTGGCTGCCGCATTTTGTGTTTCATGCGGCGGCGTACAAACACGTACCGCTCATGGAAGACCATCCGTATGAAGCC ATTAAGGTCAATGTGTTTGGGACAAAGATTCTGGCCGACCTCGCCGTTGAAATGGGCGTGAATAAATTTGTAATGATTTC GACCGACAAGGCGGTAAACCCTACCAATGTTATGGGAGCGACCAAACGGTTAGCCGAATTATACGTTCAAAGCCTGAATC AACGTTTCCCCAATGATACACGTTTTATTACGACACGATTTGGCAATGTTCTTGGGTCAAACGGCTCGGTGGTGCCGCTC TTTCAAAAACAAATTCAGGCGGGTGGTCCCATCACAGTCACGCATCCCGATGTCATACGGTATTTCATGACAATCCCGGA AGCCTGTCAATTGGTACTTGAAGCGGGTAGCATGGGCAAAGGCGGCGAGATTTTCGTTTTTGACATGGGCGAGCCCGTTA AAATCACCGATCTGGCTCAGAAAATGATCAAACTCTCAGGGCTGCGCCTTGAGAAAGACATTCAAATTATTTACACCGGA CTGCGTCCCGGCGAAAAACTTTACGAAGAGCTCCTCAGCGACAAGGAGCGAACCGTGGCAACCTACCACCCAAAAATCCA GATCGCTCAGGTATATACCCCTCCCTTTACCGAAATCACCTCTTCTCTACAGGACCTGCGAAAGGCAATGCGCGAAGGTG ACAAAACACTGATGGTCATGAATTTAAAAACGATTGTTCCTGAATTTGTAAGTAACAACTCCCTTTACGAGGAATTGGGC GGCTTGGAATTCAGTTAA Protein sequence : MIEQLLTKYSNRFVSRHLILAIDITVVIVAFVIACILRVNFEIYKVNWSIYKYYLLGLLINRIFFFLYFRSYTGIVRHTS FEDTSLIFKAITTSSVLTLVFSIALSRSTDNNLFYIPISILIIDYFISLFLMIASRLLVKNIYKTLIINAPGEKVNVLIY GAGELGILIKNTLLRNRHKKYNILGFIDDNPSLSFKTLEGVVVYPEADADIRFIEGSNPEDIEVILAINDIKPYRKNQII ERFLKRDIIVKVAPSIYDRLGNEELKSEEIRNIRIEDLLERDPIQLDNQSISRQLAGRVALVTGAAGSIGSEIIRQLIRF QPQTLILLDQSESGLYDLENELKQQFQHYLGDGTMVIVKVADVTDEVRMRHIFSHWLPHFVFHAAAYKHVPLMEDHPYEA IKVNVFGTKILADLAVEMGVNKFVMISTDKAVNPTNVMGATKRLAELYVQSLNQRFPNDTRFITTRFGNVLGSNGSVVPL FQKQIQAGGPITVTHPDVIRYFMTIPEACQLVLEAGSMGKGGEIFVFDMGEPVKITDLAQKMIKLSGLRLEKDIQIIYTG LRPGEKLYEELLSDKERTVATYHPKIQIAQVYTPPFTEITSSLQDLRKAMREGDKTLMVMNLKTIVPEFVSNNSLYEELG GLEFS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-81 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Runsl_4096 | YP_004657575.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 2e-80 | 44 |
