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Name : Runsl_3912 (Runsl_3912) Accession : YP_004657400.1 Strain : Runella slithyformis DSM 19594 Genome accession: NC_015703 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 4516981 - 4518249 bp Length : 1269 bp Strand : + Note : PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; KEGG: aae:aq_561 recombination protein RecN DNA sequence : ATGTTTGCATTGGTCGACTGCAATAATTTTTACGTTTCGTGTGAACGGGTTTTTAACGGGAAAATACACCACAAACCCGT CGTGGTGCTTTCAAATAATGACGGTTGCGTCATCGCAAGGTCCAACGAAGCCAAGGCCCTCGGCATCAAAATGGGTGCTT TAGCCTTTGAAAATGAGGACTTTTTTACGAAAAATAACGTAGAAGTCTTTTCTTCCAACTACGCTTTGTACGGCGATATG TCCGACCGCGTCATGAAAACCATTGCCGAAATGGTGCCCGATATGGAAGTGTATTCCATAGACGAAGCTTTCATTGATTT TCACCATATGCCCTACGAGGATTTGGAAGCGTTGGCGCAGAAAATCCGTCAACGCGTCAAACAGTACACGGGTATTCCCG TCAGCATCGGCATTGCGCCCACCAAAACGCTGGCCAAAGTCGCCAATCGTTACACCAAAAAGTACCTTCCCCACATCGGT GTTTATCAGATTGACTCCGATCACGATGCTGAGAAGGCACTGGTCAACACCTCCGTGGAAGATATTTGGGGCGTGGGCTA CAAATACGCCAAAATGCTCAACGAGCATAATATCTATAATGCCCTGGAACTGACCTACGCCAAAGAGGAATGGATACGCC AAAAAATGCACGTCGTGGGCGTACGGATGTTACACGAATTGCAGGGTACGATCTGCTATAACCTTGACAATGAACCCTCT CCCAAAAAAGGCATTTGTGTTTCCCGTTCGTTCGGCCAGTCGCAAAAAGACGTTAAAGTGATCACGGAAGCTGTGGCCAC CTTTGCGGCCCGTTGCGGTGAAAAACTCCGTAAACAGCAGAGCTGCGCTCACATCGTCCATGTATTTCTCTACACCAATC GCCACCGACAGGACCAACCGCAGTATTTCAACTCTAAAGTGCTGCAGTTGCCGACTTCCACCAACAGCAGCATCGAAATC ATCCGCTACGCCCTGCGGGGATTGGAGTTGATCTTTAAATCAGGTTACAGTTACAAAAAAGCGGGTGTGATGATCTCGGG AATTGTGCCCGAAAATCAGGTACAAATCGACCTGTTTGATACTCGAAAACGCGAAATTGATACCAAAGCCATGAAAGCGC TCGACGAGCTCAACCGTCGCATGGGCCGCGATACGGTCAAAATAGCGGTGCAGGGTTTCGGCCGCGACTGGCACCTTCGT CAGGAACGAAAATCAAGGTGCTATACTACCCGCTGGCAGGAAATTTTAGAAGTAGAAGCGTGGGGGTGA Protein sequence : MFALVDCNNFYVSCERVFNGKIHHKPVVVLSNNDGCVIARSNEAKALGIKMGALAFENEDFFTKNNVEVFSSNYALYGDM SDRVMKTIAEMVPDMEVYSIDEAFIDFHHMPYEDLEALAQKIRQRVKQYTGIPVSIGIAPTKTLAKVANRYTKKYLPHIG VYQIDSDHDAEKALVNTSVEDIWGVGYKYAKMLNEHNIYNALELTYAKEEWIRQKMHVVGVRMLHELQGTICYNLDNEPS PKKGICVSRSFGQSQKDVKVITEAVATFAARCGEKLRKQQSCAHIVHVFLYTNRHRQDQPQYFNSKVLQLPTSTNSSIEI IRYALRGLELIFKSGYSYKKAGVMISGIVPENQVQIDLFDTRKREIDTKAMKALDELNRRMGRDTVKIAVQGFGRDWHLR QERKSRCYTTRWQEILEVEAWG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 2e-75 | 43 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 4e-67 | 41 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 4e-67 | 41 |
