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Name : Runsl_3894 (Runsl_3894) Accession : YP_004657382.1 Strain : Runella slithyformis DSM 19594 Genome accession: NC_015703 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 4501508 - 4504345 bp Length : 2838 bp Strand : + Note : PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type I restriction and modification enzyme - subunit R C terminal; Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; KEGG: sun:SUN_2300 hy DNA sequence : ATGCACCAGACCGAAGGAGAACTTGAAAAAAAATTGATTGAGGCATTGGTCAAGATAGGTTATAAATATGTGCCTATCAA AGATGAAGCAGCTTTGGCGGCCAACCTCAAAACTCAGATTGAGAAACACAACAACGTAACTTTAACCGACAAAGAATTTG CCCAAGTGCTAAACCACCTCAACAAGGGCAATATTTGGGATAAAGCCAAGATTTTGCGCGATAAAATGCAGCTTACCAAA GAAGACGGTAGGAGCGTTTATATTGAATTTCTCAATCAGGAAGGTTGGTGTCAAAACGAATTTCAGGTAACCAGCCAAGT CACGGTCGAAGGTTCGTACAAAAACCGTTATGATGTTACGATTCTGATCAATGGCCTGCCATTGGCCCAAATCGAACTCA AACGCCGTGGCCTGCAACTCAAAGAAGCCTTCAACCAAACCAATCGGTACCAACGGCATTCGTACAATGCCAACGATGCG TTGTTTCAGTACATTCAGATTTTTGTCATTTCCAACGGGGTAAATACCAAATACTACAGCAACAACGCCCGTCAGCATTT CAATCAAACCTTTTATTGGTCGGATGTTAATAATGACCTCATTACCGATCTGTTTGCTTTTACGGATGTATTTCTTGAGC CCTGCCATTTGTCAAAAATGATCACGCGGTATGTGGTGTTGGCCGAAGAAAAAAAGTGCCTGATGGTACTGCGTCCGTAC CAGTATTTTGCCGTAGAAAAGATCATTGACCGTGTCAAAACCACCCGTAACGACGGACCGCACAAAAACGGCTACATCTG GCATACCACAGGCTCAGGCAAAACCCTGACCTCCTTCAAGGCCAGCCAAGTACTGATGAATCAGGCGGGCGTTCATAAGG TGGTTTTTGTGGTGGATAGAAAAGATTTGGATTATCAAACCACCAAAGAATTCAACAGTTTTTCTGACGGCAGCGTCGAC GGTACCGACAATACCAACAAGCTCGTTCAGCAGTTTACGGATGATACCAAACTCATCGTGACCACCATTCAGAAGCTACA TAATGCCATCTCCAAAAAGCAGTATTTGGCCCGAATGGAAAAGCAAAAAGATAAACGGATTGTCTTTATTTTTGACGAAT GCCACCGCACTCAATTCGGCAAAACCCACGGGGCTATTAAAGCGTTCTTTACCAACAATCAGATGTTTGGCTTTACAGGA ACCCCCATCTTTAAAGACAATGCCGCTTCGTATGATGGCCTGAAACGTACCACCAAAGATTTATTTGAGGAATGTTTGCA CAAATACGTCATCACGGATGCCATCAAAGACCAAAACGTTTTGAAGTTTTCGGTCGAATACGTAGGAAAATACCGAAGAA AGGACAGCGTCAACGAGATCGATATTGAAGTAGAAGACATCGACACCAAAGAACTGATGGAGTCGGATGTAAGGATTGAC AAAGTTTCTGATTATATCATCGCCAACCACGACCGCAAAACCCACAGCCGAGCCTTTACGGCCATGTTTTGCGTCAGCAA TATTGATACCCTCAGCAAGTATTACGACGCCTTGGCCAAGAAAAAAGCCGAGGGCAGGCATAATTTGAGGATTGCTACCA TTTTCAGTTATACCGCCAACGAAGACGATAAAGATGCCACTGGCTTAGATGCCGATATTTTGGACGATACGGCCCCTATA AATCTACACAGCCGTGATAAACTTGAAAAATACATAGCTGACTATAACCAGCTATTCGGTACCAAACACTCCACCAAAGA CAGCCAGGCGTTTTATACGTATTACAATGAGATCTCTATGCGCGTACGGAAGCGTGAGGTAGATATTTTGTTGGTGGTCA ATATGTTTTTGACGGGGTTTGACAGTCCTTTGCTCAGTACGCTGTATGTCGACAAAAACCTAAAACATCATGGTTTGATA CAGGCGTTTTCGCGCACAAACCGAATTTTAGACGACAAAAAATCACACGGAAATATCGTTTGTTTCCGAAATCTAAAGCC CGCCACCGATGCGGCCATTACGCTTTTTTCCAACAAAGAAGCCATTGAAGACATCATTTTAAAGCCTTACAAAGACTATA CGGCCCGTTTCAATGAGGTGTATAAGAATTTATTGGCGGTAGTGCCCACCGTTGGGAGCGTTGACAGTCTACCCAGCGAA GTAGAGCAACTGGAGTTTATCAAGCATTTCAGGGAGTTGATCAAGATAAAAAATGTGCTGGGCACCTTTGCCGACTTCAA AATGGAAGATCTGCTAATACCCGAACAGGATTTTGAAGATTATAAAAGTAAGTACCTCGACCTCCACGACCAAGTAAAGA GCAGCACCCAAAAAGAAAAGGTTTCGATCTTGGAAGACGTTGACTTTGAACTCGAACTAATCCACCGCGACGAAATCAAC GTAGCCTATATTCTGGCTTTGTTGGTCAAATTCAAAGGTGCCACCCAATCGGAGCAAGACAAAAAACGTCGTGAGATTAC GGAATTATTGGAAGGGCAAGTACAGCTCCGCAGCAAACGCAAACTGATTGAGAAGTTTATCGACGAAAATATCCCGCACA TCACCGACAGCGATCAGGTAGAAAATGAGTTTGAAGAGTTCTGGAACTTGGAAAGAGAAAAGGCGTTGACCGAGCTTTGC GAAACGGAGCACATCAACAACGACAAACTCCGAAACGTAGTAACCGAATATCTCTTTGCTCAGCGCCTGCCCCTCACGGC CGACATTGACAATATCTTGGAAGTAAAGCCCGTAGGCATCCTAAACCGAAAAACGGTTTTCACCCGTATCAAAGAAAAGA TCAAAGACTTTATAGAAACATTTATTGAAGGGGTGTAA Protein sequence : MHQTEGELEKKLIEALVKIGYKYVPIKDEAALAANLKTQIEKHNNVTLTDKEFAQVLNHLNKGNIWDKAKILRDKMQLTK EDGRSVYIEFLNQEGWCQNEFQVTSQVTVEGSYKNRYDVTILINGLPLAQIELKRRGLQLKEAFNQTNRYQRHSYNANDA LFQYIQIFVISNGVNTKYYSNNARQHFNQTFYWSDVNNDLITDLFAFTDVFLEPCHLSKMITRYVVLAEEKKCLMVLRPY QYFAVEKIIDRVKTTRNDGPHKNGYIWHTTGSGKTLTSFKASQVLMNQAGVHKVVFVVDRKDLDYQTTKEFNSFSDGSVD GTDNTNKLVQQFTDDTKLIVTTIQKLHNAISKKQYLARMEKQKDKRIVFIFDECHRTQFGKTHGAIKAFFTNNQMFGFTG TPIFKDNAASYDGLKRTTKDLFEECLHKYVITDAIKDQNVLKFSVEYVGKYRRKDSVNEIDIEVEDIDTKELMESDVRID KVSDYIIANHDRKTHSRAFTAMFCVSNIDTLSKYYDALAKKKAEGRHNLRIATIFSYTANEDDKDATGLDADILDDTAPI NLHSRDKLEKYIADYNQLFGTKHSTKDSQAFYTYYNEISMRVRKREVDILLVVNMFLTGFDSPLLSTLYVDKNLKHHGLI QAFSRTNRILDDKKSHGNIVCFRNLKPATDAAITLFSNKEAIEDIILKPYKDYTARFNEVYKNLLAVVPTVGSVDSLPSE VEQLEFIKHFRELIKIKNVLGTFADFKMEDLLIPEQDFEDYKSKYLDLHDQVKSSTQKEKVSILEDVDFELELIHRDEIN VAYILALLVKFKGATQSEQDKKRREITELLEGQVQLRSKRKLIEKFIDENIPHITDSDQVENEFEEFWNLEREKALTELC ETEHINNDKLRNVVTEYLFAQRLPLTADIDNILEVKPVGILNRKTVFTRIKEKIKDFIETFIEGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0054 | YP_300144.1 | type I site-specific restriction-modification system restriction subunit | Not tested | SCC15305cap | Protein | 0.0 | 46 |
