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Name : Runsl_3684 (Runsl_3684) Accession : YP_004657174.1 Strain : Runella slithyformis DSM 19594 Genome accession: NC_015703 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 4277130 - 4277918 bp Length : 789 bp Strand : + Note : PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR002523:IPR004488; KEGG: sli:Slin_2267 magnesium and cobalt transporter CorA; PFAM: Mg2+ transporter protein, CorA- DNA sequence : ATGATTATCGGAATTATTCCCGCCCGCTACGCTTCGACGCGTTTTCCCGGCAAACCCCTCATTGATATTCAGGGCAAAAG CATGATTCGGCGCGTGTATGAGCAGGCGTCGCAGGCTAAATGCCTTTCGGAAGTGATCGTAGCTACCGACGATGAGCGCA TTCTCAACCATGTACAATCCTTCGGCGGCAAAGCCGTCATGACGCACCCCGATCACCCCAGCGGCACCGATCGTTGTTGG GAAGCGTACTGTTTAGGAGTGAGAAGTCAGGAGCCGGAAGCCAAGGGTACTTCCTCTTACTCCTCACTTCTGACTTCTCA CTCCTATGTTATAAACATTCAGGGCGATGAGCCTTTTGTGGCTCCCGAACAGATTGATGAGTTGGGCGCGGTGCTGGATG GGAGTGTAGAGTTGGCCTCACAGATGATTCCCGTCAGCGACCACGACGTACTGTTTGATGTAGGAGAAGCGAAAGTGATT GTCAATCAATCGTTTGAGGCTATTTATTTCAGCCGGCAGGTGTTGCCGTTTTTAAAAGGGATAGATCCGAAAGAATGGCA CAATCATCATACGTATTATCGCCAGGTAGGAATGTATGCATACCGGTCCGATATTTTAGAGAAAATCACTCAACTGCCCG TTTCTGACTTGGAAAAAGCCGAATCGCTGGAGCAGCTGCGCTGGATTCAAAACGGATACCGGATCAAAATGGGGCTTACG GCCTACGAAAGTCACTGCATCGATACACCCGAAGATGTGGAGAAGGTATTACGTTTGATGAACGCATAA Protein sequence : MIIGIIPARYASTRFPGKPLIDIQGKSMIRRVYEQASQAKCLSEVIVATDDERILNHVQSFGGKAVMTHPDHPSGTDRCW EAYCLGVRSQEPEAKGTSSYSSLLTSHSYVINIQGDEPFVAPEQIDELGAVLDGSVELASQMIPVSDHDVLFDVGEAKVI VNQSFEAIYFSRQVLPFLKGIDPKEWHNHHTYYRQVGMYAYRSDILEKITQLPVSDLEKAESLEQLRWIQNGYRIKMGLT AYESHCIDTPEDVEKVLRLMNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 7e-32 | 41 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 3e-32 | 41 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 4e-32 | 41 |
