|
Name : Runsl_3552 (Runsl_3552) Accession : YP_004657045.1 Strain : Runella slithyformis DSM 19594 Genome accession: NC_015703 Putative virulence/resistance : Resistance Product : winged helix family two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 4125840 - 4126544 bp Length : 705 bp Strand : - Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: sli:Slin_4056 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membran DNA sequence : ATGAACAACGACCCTGAACCAAAGAGAATCCTTATCATTGAGGATGACCAACGCATTGCGCAGCTACTAACCAGAGGCTT GACCAATAAAGGGTTTGAGACGGAGGTATCCTACGACGGCGTGTTGGGGTTGCGTCGCGCCCGGACGGTGGCCTTTGACT TAGTCATTCTTGACATCAACCTTCCCGAGCTGAGCGGCTATGAAGTCTGCCAGCGTATTCGTGAGTCAAAACCTACGCTG CCCATTCTGATGCTTACGGCCATGAGCGAAATGGAAGACAAAATTGAAGGCTTTGAGGCAGGAGCCGATGATTATATTGT AAAACCTTTCGATTTCCGCGAACTATATCATCGGGTGCTGGTCGGACTCCGAAGAAACAGCCCGGAAGCGGAAACCGTAG GGAAGGTCCTGCACATTGCCGATTTAGAAGTATTTTTAGACAGCAAATTGGTAAGACGCGGTGGCAAAGAAATAAAACTT ACGGCCCGTGAGTACGAATTTTTGGTGTTTTTGGTAAAAAATAAAGGGAAAGTTCTCTCCAAAAACGATATCGCAGCTCA GGTATGGGATATCCATTTTGACACGGGAACCAATGTAATCGAAGTCTATATCAATATCTTACGCCGAAAAATAGATCGCG ATTTCGAACCCAAACTGATCCACACGCGCCCAAGTCTGGGCTATATCCTGCGCGAATACCCATGA Protein sequence : MNNDPEPKRILIIEDDQRIAQLLTRGLTNKGFETEVSYDGVLGLRRARTVAFDLVILDINLPELSGYEVCQRIRESKPTL PILMLTAMSEMEDKIEGFEAGADDYIVKPFDFRELYHRVLVGLRRNSPEAETVGKVLHIADLEVFLDSKLVRRGGKEIKL TAREYEFLVFLVKNKGKVLSKNDIAAQVWDIHFDTGTNVIEVYINILRRKIDRDFEPKLIHTRPSLGYILREYP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 4e-34 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Runsl_3552 | YP_004657045.1 | winged helix family two component transcriptional regulator | BAC0638 | Protein | 5e-38 | 47 |
| Runsl_3552 | YP_004657045.1 | winged helix family two component transcriptional regulator | BAC0308 | Protein | 3e-42 | 46 |
| Runsl_3552 | YP_004657045.1 | winged helix family two component transcriptional regulator | BAC0083 | Protein | 7e-42 | 46 |
| Runsl_3552 | YP_004657045.1 | winged helix family two component transcriptional regulator | BAC0197 | Protein | 2e-43 | 46 |
| Runsl_3552 | YP_004657045.1 | winged helix family two component transcriptional regulator | BAC0111 | Protein | 1e-45 | 44 |
| Runsl_3552 | YP_004657045.1 | winged helix family two component transcriptional regulator | BAC0125 | Protein | 2e-43 | 43 |
| Runsl_3552 | YP_004657045.1 | winged helix family two component transcriptional regulator | BAC0347 | Protein | 7e-38 | 41 |
